Ll_transcript_373318

• Id Trinity: TRINITY_DN47018_c0_g1_i4
• Name Transcript: Ll_transcript_373318
• Sequence: TAAATATTTTTCTTCCTCGATATATAAGTTACCGACCAAGACATGTTTACCCTCATCTCTCTAATTTCAATCCCTCCATCTTCCTTCCCAAAAATTCACC GCACATAGTAACCTTTCACTCTGTAATCGAAGCCCTACCCCATTACTTCAATTTCTAAGCCACCAATTGGGACACCCAGTCCTTCAAATTAAGGGCAAAA CAAAAAGCTAGCTCAGATATTTCTTGCAAGTCAGCTTTGTTGAGCACACTTCCTGAATATGGGTGACTTGGAGCAGAGCATGGAAAATAGCACAGAGGCA CTGATGGATCAGCTTGCTCAGGCATTTCTTGAATTGGAAGCTCAAAAGGGGGATTTTGAGATCAAGATTCAGTGGGTTGAAATTAAGCAGCATTTCCTTG ACCTTGAGGCGGCCTCGAAGAAGCAACTTGAAGAGGTGGAAGCCAAAGAGAAGGCGTATGAAGTGAAACAAATAGAAATGGATACACTAGTTGCAGAGAG AAAGGCGGCAGTTGATTCTAAAGAGCAAGACCTCTTAGATCGGCTGCAGGAGCTTAAGGATGTTGCTGCTGCTTCCATTGCAGAAGCCCGTGATATTTAT AAGACTGCAACTTTGGAACCTGTATATGATGAGGAGAAGGAGAGCAAAGGTAACGAGGTAAGCAACTTTCTCGGTGATACAGATTCAGAGGAGGATTTTC CTCATAAATCAGGTGAAAATTCTGAAGGTGTGGCCAATGAGTTTAGGCCACTTCCTGAGCTGACACATTTTTGTATGAAAATGAATGTGAAAGGCCTTCT GAACTATATTGAGGAGAATAAAAAAAGTCTGCCTGTTATTCGTGAAGCAATTTCTGTTGCATTAGAAAGTGCAACTGATCCGGCACAGTTGGTGCTGGAT TCTCTGAAGGGGTTTTACCCCACCAAACCAAAAGATAAAAGGAATGCTGCCCTTCATGGCAGGCGAAAGTCCTGTATTATAATTATGGAAGCCTTAGCCA CCATAATGGCAAGGGCTGACCCAGGTGCAGATCACTTTCTGAACCCTGAAACCAAGCAGCAAGCCAAAGCAATTGCTGATGAGTGGAGGCCCAAGTTAGC TACAGCGGACATTGATAGTGCCAATGGAAACTCATTGGAAGCAGAGGCATTCTTGCAAGTTCTTTCAACTTTTAGGATTGCTTCAGAGTTCGATGAAGAA GAACTCTGCAAGCTTGTACTTGGAGTTGCTCAGCGTAAGCGAGCACCAGAGCTCTGCCGCTCTGTTGGGTTAATCAACAAAGTGCCAGGTTGGTGTCTTT TAAATAAACTGACTTGTGAAGTCTGCAGTGAAGGATAGTCCTGTTAGATATCATTCGTACACTAGATGAGTAATTTTCTTTAGTGAGTGTTTGGATAAGT TAATTTTAGGGGAATGTAACTGACAAGAGTATTGAACATATATTTTTTCTGAGCATCCTGCTTTTGGTCAAAGAATTTCAATTTCCTTGGAATTTTAGTT CGTTACTCTTCCATTTAGGATGCGGTATTTGAAATACGAAATTGAGGTAGAATTTTGAAATCCTCCATGAACCTCTAATCTCAACGCTCTTTCTCTCCAC CTCCACGCTCCTTTCCTTTGAGTGGTTTGAACTTTGAAATGCTTCCCTTCTGTTTTAAATTCTTGAGATTTTAAAATCCCTTATCCAAACATATATTTTG CTGCTTTTGTTTTGATTTTACTTGTTAATAGGTAATGCAATCATGAGATTGTCATATATTTCTTATTCTAATTTTCACTATTTATGTAGGTATTGTAGAA TCATTAATCAGTGGCGAGAACCAAATCTCTGCTGTGCATTTTATTCATGCTTTCCAGCTCCAAGAAAGCTTCGCCCCTGTGCCCCTTTTGAAGGTTTACC TCAAGAACCAGAGGAGAGATTCACAAGTAAAGGCTGGACGTGTGAGTGATGTTCTAACTGCAAAGAATGATGCCAATGCACGAGAGCTTAGAGCACTGAG GGCTGTAATTAAGTGTATCGAAGAATACAATCTTCAATCTGAATACCCACTTGATAATCTTCAGATAAGGGTAAGTCAACTACAGAGGATCAATCCAGAT AAAAAGAGAAGTGGAGAGTTCAACAGACGTCAACTATCGAAGAGGCCAAGAGCGAATGAGAGATATTCATCGTCTCGTTCATATGGCGGCAATGCTGCTT CAGCTGGAGTTATTAGTAGGCATGTCCCCCCTGTTCAAACAGCATATGCAGGAACTCCTGATAGGTATAACCATGCTGGTGCAATTGCATATGATTATCA AGTTCCTGGCCAAGCCATACACACTCAACCAGCTAATGCCCCTCCTTTTAACTATGATCATTATGCATCATACAACCCATATATGGGTTGATTTTTACAT CTAGCATAATTCAAAACAATACGGTTAACCAATTAGTGGTTCTATTTCTGCATTTGAAATTGTGACATTTGGTTTTGATTTTCTTTGTTAGAAGCTAAAG GACAGGCATACTCTTGTATTTCTATCCAAGTATAACTGAAGCTAAATGAAGTGCTTGTTTGTCTACCCCTTTTTCATACTCCCCTCACTTTGGAATTGAG AGTATATTTTAGGCATATTATATCAAATTATGAAGATTTCACTCTGGTTTGCAAGGAATATACAGTGTATTATATTTTGGAAACAGTAAGGCG
• Tissue: pods
• Gene name: LI_gene_149012;
• Additional information: details;

Expression of Ll_transcript_373318

FPKM

• PAB: 0.6
• PNAB: 0.4
• PS1: 0.6
• PS2: 0.8
• PS3: 0.7
• PW1: 0.1
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373318

• Blastp: FRIGIDA-like protein 3 from Arabidopsis with 37.85% of identity
• Blastx: FRIGIDA-like protein 3 from Arabidopsis with 37.85% of identity
• Eggnog: Frigida-like(ENOG4110RQD)
• Kegg: Link to kegg annotations (AT5G48385)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446836.1)
• Pfam: Frigida-like protein (PF07899.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;