| Id Trinity | TRINITY_DN47019_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_372356 |
| Sequence | CATAGGAACACAAGAAGAGAAGAGAAAATAGGGTTTATTTGCTTTACTCATTTCTAAAATCATCTATTTTCAATTCCTCTTCTTCATTTCCTCTTTCTAT TCCTAGCTTATCCCAACTTCACCTTCAAACCCTAGCTTCATACCCATCACCCATTTCTACTCAATTTCACCATAATGCTGCTCCAATTTCACTTCAAGTG CATGTGTTGTTTCTGAGAGAAGAGGGAAGATATGGAAGGGGGTAACCATGGGGTTCTGTTATCTTGTGCAATTTGTGGGTCCCTTTTCACTGTTCTAGGG TTTGCTTCCTTCTTCTTACTTTGGGCTGTTAATTGGAGGCCCTGGAGGATTTATAGTTGGATCTTTGCTCGGAAATGGCCAAATATCTTGCAAGGTCCTC AACTCCATTTGCTCTGTGATTTCCTGAATCTTTCCGCATGGGTTGTTGTTATTTCTCCAGTTCTGGTGCTTATCATTTGGGGGTCCTGGTTAATTGTAAT ATTGGGTCGAGACCTGATTGGTTTGGCTGTTATAATGGCTGGCACTGCTCTTGTATTGGCATTTTATTCGATTATGCTTTGGTGGAGAACGCAATGGCAA AGCTCAAGAGCTGTTGCCATTCTGCTTCTTCTTGCTGTTGCTCTACTCTGTGCATATGAACTTTGTGCGGTGTATGTTACAACTGGTTCACGGGCATCTG ACCGCTATTCTCCTTCTGGTTTCTTTTTCGGAGTCTCAGCAATTGCTTTAGCAATCAACATGCTATTTATTTGCAGGATGGTATTTAATGGGAGTGGCTT AGATGTGGATGAATATGTACGTAGGGCGTACAAATTTGCTTATTCTGATTGTGTTGAATTGGGTCCTGTGGCATGTTTACCTGCACCACCAGACCCAAAT GAGTTGTATCCTCGGCAATCTAGAAGAGTTTTCCATCTTGTAGCTCTCTATGTTGGCTCGCTATTGGTTCTGTTAGTATACTCCATCTTGTATGGTCTAA CAGCAAAGGAGAAAAATTGGCTTGGAGCAATCACATCGATTGCTGTCATTATTCTTGACTGGAATATGGGAGCTTGCCTGTATGGTTTTCAGCTTCTTAA TAGTCGTGTTGCCGCACTATTTATTGCTGGAACATCCCGGGCGTTTCTTATTTGTTTTGGAGTGCAATACTGGTATTTGGGGCACTGTATCAGTTATGCT GTTATGGCGTCTGTACTTTTAGGAGGCGCTGTTTCTCGCCATTTATCAGTCACAAACCCGTTAGCTGCAAGGAGAGATGCCTTACAAAGCACTGTAGTTC GCCTGAGAGAAGGATTTCGTAAAAAAGAGCATAATAGTTCATCTAGCTCTTCTGAAGGTTGTGGCTCAAGTATGAAACGGAGTAGTAGTGTTGAAGCTGG TAATCTTGGCAATGTAATTGATGCTAGCAGGGGTGTTGCTGCAGTGGATGGGAGCAATTGGAATAATGCCCTGTTTCAAACTTCTAGTTTTCCGGATGGA ATCATTAGTGACAAAAGCATAGATAGTGGAAGGTCAAGTGTAGCATTGCATAGCAGCTCTTGTCGCTCAGCTGCTCAAGAGCCTGAACCTGGAACGTCAT CTGATGACAGAAATTTGGATCACAATAATTCAATGGCTGTTTGTTCTAGTAGTGGTCTTGATAGTCAAGGGAATGATTCCAGTGCATCAAACTCTGCAAA TCAACAAACACTAGATTTGAGTTTAACTCTTGCATTTCAAGAAAGGTTGAATGATCCTAGGATAGCAACTATGCTGAAAAGAAGGACAAGACAAGGCGAT GTGGAACTATGTAGTTTATTGCAGGATAAAGGCTTGGATCCGAATTTTGCTATGATGTTAAAAGAGAAAAGTTTAGAATTAGATCCAACTATTCTGGCAT TATTGCAGAGGAATAGTCTAGATGCAGATAGAGATCACCGTGACAATACTGATAATGCAAGTGTTGAGAATGTCATGCCTAATCAAATTTCATTATCTGA AGAACTTAGGCTACATGGGCTTGAAAAGTGGCTTCAGTTGTGTAGACTTGTATTGCATCACATTACGGGTACTCCAGAGCGAGCCTGGGTTCTGTTTAGT TTAATTTTCATAGTTGAAACCATCATTGTTGGTATATCTCGTCCAAATACAATCAAAATCTTCAATGCAAGGCACCAACAGTTTGAGTTTGGCCTGGCTG TGTTGCTTTTGTCTCCTGTGATATGTTCAATTATGGCTTTCCTTCAATCACTAATGGCAGAAGAAATGGTCATGACATCAAAACCGAGGAAGTATGGTAT TATTGCTTGGCTGCTCAGCACGTGTGTTGGATTGTTGCTCTCCTTCTTGAGCAAATCATCTCTTCTCCTCGGATTGTCCTTGACTGTGCCACTAATGGTG GCATGCCTTTCTGTTGCCATCCCTATATGGATTCGCAATGGCTGCCAATTTTGGATTCCCTGCCTGAATTGTACTGGAAGTGCTGGAAATGATAGAACTC CTGGTAAAAAGGAGGGTATAGCTCTAATTGGTTGTATGTCAGTATTCGCTGTATCTGTACTGGCTTTGGGATTAATAGTTTCTGCAAAGCCTTTAGATGA TTTAAGATACAAGGGATGGAATGGTGATCAGAAAAGTTTGGCCTCTCCTTACACATCGTCTGTTTTTCTTGGCTGGGCAATGGCTTCTGCCATTGGTTTA GTTGTTACTAGTGTGCTACCGATAATTTCATGGTTTGCAACATATCGATTCTCCTTTTCCTCTGCTGTCTTTATTGGAATTTTTGCAGTTATCCTCGTTG CATTTTGTGGTGTGTCTTATTTGGAAGTCATCAAATCTAGGGATGACCAAGTTCCAACGCAGGGTGATTTTTTAGCCGCTTTACTTCCTTTAGTCTGCAT TCCAGCAGTGCTCTCACTTTCCTGTGGCTTGCTTAAGTGGAAGGATGATGATTGGAAACTTTCACGAGGTGTATATATCTTTGTTATCATTGGTCTACTT CTTCTGCTTGGTGCTATATCAGCTCTGATTGTTGTCATCAAACCTTGGACTATAGGGGTGTCGTTTCTTTTGGTCCTTCTTCTTATGGTATTAGCGATCG GTTCCATTCACCACTGGGCATCAAACAATTTTTATTTGAGCCGTACACAGATGATATTTGTTTGCTTTCTCTCGTTTCTATTGGCTTTGGCAGCATTTCT TGTTGGATGGTTTGAAGAGAAACCATTTGTTGGCGCATCAGTTGGTTATTTTTCATTTCTATTCCTTCTTGCTGGGCGGGCATTGACAGTTCTTCTTTCA AATCCAATTGTGGTATATTCTCCCCGAGTTTTGCCAGTGTATGTTTATGATGCTCATGCAGATTGTGGAAAGAATGTCAGTGTGGCCTTTCTCATGCTGT ATGGGGTTGCCCTGGCAACTGAAGGCTGGGGGGTTGTTGCTAGTTTAATGATTTATCCACCCTTTGCCGGTGCAGCTGTATCAGCAATCACACTTGTTGT TTCATTTGGGTTTGCTGTTTCTCGTCCTTGCCTTACTCTTAAGATGATGGAAGATGCCGTACATTTCCTCAGCAAGGAAACTGTTGTTCAAGCAATTGCT AGATCAGCAACAAAGACCAGAAATGCATTATCTGGAACCTATTCAGCACCACAGAGGTCAGCTAGCTCTGCAGCACTTCTGATTGGAGACCCTACCATTA TGCGTGATAGGGCAGGAAGTTTTGTGCTTCCTAGAGCTGATGTCATCAAATTGAGAGACCGTTTGAGAAATGAAGAATTAGTTGCAGGGTCGTTCTTTAG TAGATTAAGATATGGAAGGACATTTCACCGTGAGCCTACCAGTGATGTAGATCATAGAAGAGTAATGTGTGCTCATGCACGTATACTCGCTCTAGAAGAG GCTATTGATACTGAGTGGGTGTACATGTGGGACAAGTTTGGTGGTTATTTGCTTTTGTTGCTTGGTTTGACGTCTAAGGCAGAACGAGCACAGGATGAGG TCCGTTTGAGACTTTTTCTTGACAGCATTGGATTTTCTGACCTAAGTGCTAAGAAAATAAAGAAGTGGATGCCAGAAGATCGCAGGCGATTTGAAATCAT TCAGGAGAGTTACATAAGAGAAAAGGAGATGGAAGAGGAAATCTTCACGCAGAGACGTGAAGAAGAGGGGAGAGGGAAAGAAAGAAGGAAAGCTCTACTT GAAAAAGAGGAGCGTAAATGGAAGGAGATAGAAGCTTCTCTGCTCTCCTCCATTCCGAATGCTAGCAGCAGAGAGGCTGCAGCCATGGCAGCTGCAGTGC GTGCAGTAGGAGGTGATTCTGTTCTAGATGACTCTTTTGCTCGAGAGAGGGTTTCAAGCATTGCACGCAGGATACGTGCTTCACAGTTATCTCGTCGTGC ACTTCAGGAACTGAAATAAACAAGAGCTTTGTTTTCACTATGTCCTTCACAAAGTGTGAAAGCAGGAAACAAAGTGGCAGCAGGGTTGCAGTTTTTGTTG TTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149014; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372356
| Blastp | Calpain-type cysteine protease DEK1 from Arabidopsis with 75.11% of identity |
|---|---|
| Blastx | Calpain-type cysteine protease DEK1 from Arabidopsis with 75.05% of identity |
| Eggnog | Calpain-like cysteine peptidase(ENOG410XP0B) |
| Kegg | Link to kegg annotations (AT1G55350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461690.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |