Id Trinity | TRINITY_DN47019_c0_g1_i8 |
---|---|
Name Transcript | Ll_transcript_372363 |
Sequence | TTTTAAGTTTAGGTGGATACTTGATAACACATTATCTCTGTCTCTTGCTTATTTGCTGCTTCAGTATGGTATTATTGCTTGGCTGCTCAGCACGTGTGTT GGATTGTTGCTCTCCTTCTTGAGCAAATCATCTCTTCTCCTCGGATTGTCCTTGACTGTGCCACTAATGGTGGCATGCCTTTCTGTTGCCATCCCTATAT GGATTCGCAATGGCTGCCAATTTTGGATTCCCTGCCTGAATTGTACTGGAAGTGCTGGAAATGATAGAACTCCTGGTAAAAAGGAGGGTATAGCTCTAAT TGGTTGTATGTCAGTATTCGCTGTATCTGTACTGGCTTTGGGATTAATAGTTTCTGCAAAGCCTTTAGATGATTTAAGATACAAGGGATGGAATGGTGAT CAGAAAAGTTTGGCCTCTCCTTACACATCGTCTGTTTTTCTTGGCTGGGCAATGGCTTCTGCCATTGGTTTAGTTGTTACTAGTGTGCTACCGATAATTT CATGGTTTGCAACATATCGATTCTCCTTTTCCTCTGCTGTCTTTATTGGAATTTTTGCAGTTATCCTCGTTGCATTTTGTGGTGTGTCTTATTTGGAAGT CATCAAATCTAGGGATGACCAAGTTCCAACGCAGGGTGATTTTTTAGCCGCTTTACTTCCTTTAGTCTGCATTCCAGCAGTGCTCTCACTTTCCTGTGGC TTGCTTAAGTGGAAGGATGATGATTGGAAACTTTCACGAGGTGTATATATCTTTGTTATCATTGGTCTACTTCTTCTGCTTGGTGCTATATCAGCTCTGA TTGTTGTCATCAAACCTTGGACTATAGGGGTGTCGTTTCTTTTGGTCCTTCTTCTTATGGTATTAGCGATCGGTTCCATTCACCACTGGGCATCAAACAA TTTTTATTTGAGCCGTACACAGATGATATTTGTTTGCTTTCTCTCGTTTCTATTGGCTTTGGCAGCATTTCTTGTTGGATGGTTTGAAGAGAAACCATTT GTTGGCGCATCAGTTGGTTATTTTTCATTTCTATTCCTTCTTGCTGGGCGGGCATTGACAGTTCTTCTTTCAAATCCAATTGTGGTATATTCTCCCCGAG TTTTGCCAGTGTATGTTTATGATGCTCATGCAGATTGTGGAAAGAATGTCAGTGTGGCCTTTCTCATGCTGTATGGGGTTGCCCTGGCAACTGAAGGCTG GGGGGTTGTTGCTAGTTTAATGATTTATCCACCCTTTGCCGGTGCAGCTGTATCAGCAATCACACTTGTTGTTTCATTTGGGTTTGCTGTTTCTCGTCCT TGCCTTACTCTTAAGATGATGGAAGATGCCGTACATTTCCTCAGCAAGGAAACTGTTGTTCAAGCAATTGCTAGATCAGCAACAAAGACCAGAAATGCAT TATCTGGAACCTATTCAGCACCACAGAGGTCAGCTAGCTCTGCAGCACTTCTGATTGGAGACCCTACCATTATGCGTGATAGGGCAGGAAGTTTTGTGCT TCCTAGAGCTGATGTCATCAAATTGAGAGACCGTTTGAGAAATGAAGAATTAGTTGCAGGGTCGTTCTTTAGTAGATTAAGATATGGAAGGACATTTCAC CGTGAGCCTACCAGTGATGTAGATCATAGAAGAGTAATGTGTGCTCATGCACGTATACTCGCTCTAGAAGAGGCTATTGATACTGAGTGGGTGTACATGT GGGACAAGTTTGGTGGTTATTTGCTTTTGTTGCTTGGTTTGACGTCTAAGGCAGAACGAGCACAGGATGAGGTCCGTTTGAGACTTTTTCTTGACAGCAT TGGATTTTCTGACCTAAGTGCTAAGAAAATAAAGAAGTGGATGCCAGAAGATCGCAGGCGATTTGAAATCATTCAGGAGAGTTACATAAGAGAAAAGGAG ATGGAAGAGGAAATCTTCACGCAGAGACGTGAAGAAGAGGGGAGAGGGAAAGAAAGAAGGAAAGCTCTACTTGAAAAAGAGGAGCGTAAATGGAAGGAGA TAGAAGCTTCTCTGCTCTCCTCCATTCCGAATGCTAGCAGCAGAGAGGCTGCAGCCATGGCAGCTGCAGTGCGTGCAGTAGGAGGTGATTCTGTTCTAGA TGACTCTTTTGCTCGAGAGAGGGTTTCAAGCATTGCACGCAGGATACGTGCTTCACAGTTATCTCGTCGTGCACTTCAGACCGGAGTGACAGGTGCCATA TGTGTTCTCGATGATGAACCAACAACAAGTGGCAGGCATTATGGTCCAATTGATTCCACTCTGTGTCAAAGTCAAAAGGTCAGCTTTTCCATTGCATTGA TGATTCAACCCGAGTCTGGTCCTGTTTGCCTTTTGGGCACTGAGTTTCAGAAAAAGGTTTGCTGGGAAATTCTCGTGGCGGGTTCTGAGCAAGGTATCGA GGCTGGACAAGTTGGGCTTAGATTGATTACTAAGGGTGATAGGCAAACAACGGTTGCAAGGGAATGGAGTATTAGTGCAACAAGCATTGCGGATGGAAGG TGGCATATTGTGACAATGACAGTTGATGCTGATTTAGGTGAAGCAATATGTTATTTAGATGGTGGGTTTGATGGCTACCAGAATGGTCTGCCCTTGTGTG TGGGTAGTAGCATTTGGGAACAAGGGACGGAAATCTGGGTTGGTGTTAGACCTCCAACAGATATTGATGCATTTGGGAGGTCAGATAGTGAGGGAGTTGA ATCTAAGATGCATATTATGGATGCTTTTCTCTGGGGAAGGTGCTTAACTGAAGATGAGATTTCTGGTCTATATACCTCAATCGCTTCGGCTGACTTCGGT GCACTTGATTTCCCTGAAGATAATAATTGGCAATGGGCTGATTCACCCTCTAGGGTTGAAGGTTGGGACAGTGATACTGCTGATGTAGATTTATATGACA GAGATGACGTAGATTGGGATGGACAATATTCTAGTGGGAGGAAAAGAAGGTCAGAACGTGATGGTGTGGTGGTGGATGTGGATTCCTTTTCCAGGAAATA TAGAAAACCTAGAATAGAAACACAGGAAGAGATTAATCAACGGATGCTATCAGTAGAATTGGCCATCAAAGAAGCTCTTTTTGCTAGAGGAGAGCCACAG TTTACTGATCAGGAATTTCCTCCAAATAATCAATCGTTGTTTGTGGACCCTGAAAACCCCCCAGCAAAGTTACAGGTCGTTTCTGAGTGGCTGAGACCAG GTGAAATTGTGAGACAGAACCATCTAGACTGTGATCCATGCTTATTTTCAGGAGCACCGAATCCTTCAGATGTTTGCCAGGTTTCATGTTTTTCTTTTAA CATGCAAGAATTTGACAATAAAAGCTTGCTTATTGTATATATATATGTATATATATATATGTGTTCTGATGTTATGTACTTATATGTGTTTCTAAATTGG TCTTAATAATTGTTCTGTGCATTGAATAGGGTCGGTTAGGTGATTGTTGGTTCTTGAGCGCTGTTGCTGTTCTGACAGAGTTTTCACGTATATCTGAAGT AATCATCACTCCAGGATATAATGAGGAGGGAATATACACTGTTCGTTTTTGTGTTCAGG BLAST |
Tissue | pods |
Gene name | LI_gene_149014; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372363
Blastp | Calpain-type cysteine protease DEK1 from Arabidopsis with 78.69% of identity |
---|---|
Blastx | Calpain-type cysteine protease DEK1 from Arabidopsis with 76.51% of identity |
Eggnog | Calpain-like cysteine peptidase(ENOG410XP0B) |
Kegg | Link to kegg annotations (AT1G55350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461690.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |