Ll_transcript_371986

• Id Trinity: TRINITY_DN47020_c1_g1_i2
• Name Transcript: Ll_transcript_371986
• Sequence: CAACGACGTCGTCTTCAAGCGGCGACAATGAAGCATCGAAGATAAAGAAACAGTGTTTGGGTTGGATAGAATGGTTCAGAGGTTGGTTTTGTCTCATATA CGAAATGCTGTTTCAAAGAATCATGGCCAGCCACTTGCATAACCCTATGCCTCTACCTCCAATCAATGACCTTACCTGCATTGTTACTGGATCCACCAGT GGTATAGGCCTCGAAATTGCAAGGCAATTGGCACAAGCAGGGGCTCATGTTGTTATGGCAGTGAGGAATACAAAGGCGGCTCAGGAGTTGATCCAGAAAT GGTCGGTGGACTCTGCTGGGTTGGGTATTGCTCTTAATGTAGAGGTGATGGGTGTTGATCTTCTCTCATTGGATTCTGTAGCAAGGTTTGCTGAAGCATG GAATGCACGATCAGCACCATTGCATGTTCTCATTAATAATGCTGGAATTTTTTCCATTGGAGAGCCACAGAAATTTTCAAAAGATGGTTATGAAGAACAC TTGCAAGTGAACCATCTTGCTCCTGCTTTGCTTTCAGTACTTCTGTTGCCATCCCTTATTAGGGGTTCTCCGAGTCGAATTGTTAATGTGAATTCCATTA TGCATCATGTCGGCTTTGTTGACGCTGAAGACATGAATATCACATCTGGAAAAAGGAAATTTTCTAGTCTGATGGGGTATTCAAACAGCAAGCTGGCACA GGTTATGTTCAGTAGTGTCCTTAATAAGCGACTCCCTGCTGAATCTGGCATCAATGTATTGTGTGTGTCACCTGGAATTGTCCAAACTAATGTTGCAAGG GATCTTCCAAAAATTGTTCAATCGACATATCGTTTGGTACCTTACTTCATCTTTAATGCTCAAGAAGGTCTGTTTTATCACTTTTTCATGATAGAAATAC TTACCGTCTTTAGTTTTTAAGTTCTATCGTGGTCATTGCCTGTTTTAGATTTGTGATGTGGCTCATGTGCTCTCGTCCTTTTGGATCTAACATTTTGGTG CACTTAAAATTACTTCATTTCATATAGTAAAATATGAATTTCAGTCTTGGCAATATGAGGGCTTCTTGGATTGGGATTCTCAAAAAAGTGATTCTCCAAA AACTTTTCCAGAAGATTTTTTTTGTGAATTCACTCTTTGGAGCTTTTCCGGCAGACTTGCAAGGAAAAACCTAAACAAACTGGTCTTAAAACATGTTTCA ATGTTAGTTCAATTGGCCAACCACCCTAAGTAATTATGCAAACAAAAGTAATTGGGTGCTGAAAGTTTTCAGGACTGACTATGAAGATAACATGACTAAT GCTGCAATACAGGTTCCAGGAGTACTCTTTTTGCTGCCACTGATCCTCAAATATCAGAGTATTGTGAATTGTTGAAAGCAGATGAGTGGCCTGTTTGCGC CTTTATTTCTCAAGAGTGTCGTCCAGCGAATCCATCAGAAGAAGCGCATAACATTCAAACAGCATATGAAGTATGGGAGAAGACATTAGAGATGACTGGT CTTCCTTCTGATGCCTTGGAGAAGCTCCTAGAGGGAGAAAATGTTAAATGTCGGTACGGACATGAACAACAGTAATCTAATTTCAATGATGACAGTAAAA CACATGAGTAGCTGTAGTATCCCATCCATTCTCCCCCTTACTGATTTCTAAGGGCATTTACATTATTTATAACTAAGTAACAACCATCTTACTCCTAATT TGTCGGAGAAGAGCTTCTTTTTTTCCAACAAGATTGATAATGGCTATAACTTTGGTACTATCACATTTTTAGGGGATGTTTTCAGATCCAAAATTTAAGT GTATATCCATTTTGACTATAGAAACATTTGGGTTGGTACATAAATTCCTAAACTTGAG
• Tissue: pods
• Gene name: LI_gene_149018;
• Additional information: details;

Expression of Ll_transcript_371986

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.3
• PS3: 1.1
• PW1: 0.1
• PW2: 0.1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371986

• Blastp: Retinol dehydrogenase 12 from Homo with 36.52% of identity
• Blastx: Retinol dehydrogenase 12 from Homo with 36.52% of identity
• Eggnog: Dehydrogenase reductase(COG1028)
• Kegg: Link to kegg annotations (145226)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458836.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;