Ll_transcript_371989

• Id Trinity: TRINITY_DN47020_c1_g1_i4
• Name Transcript: Ll_transcript_371989
• Sequence: GCTAAAAAGAAACAAAGAAAAAAAAAAAGATTTAACAAAGAATTATACAGAATGAAATCATAAAAAAACATGTATCATGTTCCTAAATTTGTTTAATTTT GGGACTTCGCAACAAGTCACTACCACTACATTACTCGCGCACTACTAAAAAAGACAGATCTCGCATATTCTACGCTAACACACATAGAAAAACATAGAGA TGCCAACGCCGTCGTCTTCAAGCGGCAACAATGAAGCATCGAAGAAGAAACAGTGTTTGGGTTGGATAGAATGGTTCAGAGGTTGGTTCTATCTCATCTA CGAAATGTTGTTTCAGCGAATCATGGCAAGTCACTTGGATAATCCTATGCCTCTACCTCCAATCAATGATCTCACTTGCATTGTAACCGGATCCACCAGT GGCATAGGCCTTGAAATTGCAAGGCAATTGGCACAAGCAGGGGCTCATGTTGTTATGGCAGTGAGGAATACAAAAGCAGCTCAGGAATTGATCCAGAAGT GGTCGATCGATGCTGCCGGGTTGGGTATTACCCTCAATATCGAGCAAGGTTTGCTGAAGCATGGAATGCACGATCAGCACCATTGCACGTTCTCATTAAT AATGCTGGAATTTTTTCCATCAGAGAGCCACAGAAATTTTCGAAAGATGGTTATGAAGAACACTTGCAAGTGAATCATCTTGCTCCTGCTTTGCTTTCAG TACTCCTGTTGCCATCCCTTATTCGGGGTTCTCCTAGTCGAATTGTTAATGTGAATTCCATCGTAAGTCTCTTGCTATCTGAAAACTAAGATATGTACCT AGGATGTGAGGCTGGCACATCAAAGTTTCCTTTCTTCTATTTTAAATCAACTTGTATGTATGAACCTTTGAAAACTTGTTGCTTTTCCAAGATGTTCGTT TGATACATTCAACATGGATTGCTTGTTTTTACGCCATATCTTATGAAAGAAAAAATTCATCAACACAGAGAAAGTGATTACAAAGAGTTGGGAGTATAAG AGATCCTCCTTTAACTGTCGGAAACTTTATAAAAGGAAACATACCATACAAGTAATTAGTGTGAGGAATACAGGCTATGGGTTGATATTTGACATGTATT TAATATTCTTTGTAATATTGTTATTTTGTTTAACTCTTTATATTTACTGATGAGTGTTGATATTGCTTTACAGTTAACATTATAGTGAAATAATTATTCC GAGAAAATTGAAAATATTATTTATAGTGATTGATTTCAGCGTGTTTTAATCTCACATTCTTTTACCCTCATAATCTTAAGAGTGCTTCGTCTTTTCTTCG CCCCATTTCTTTCCCTGTAGATGCATCATGTCGGCTTTGTTGATGCTGAAGACATGAATCTCACATCTGGAAAAAGAAAATATTCTAGTGTGATTGGGTA TTCAAACAGCAAGCTGGCACAGGTTATGTTTAGTAGTGTTCTTCATAAGCGACTCCCTGGGGAATCTGGCGTCAGTGTATTGTGTGTGTCACCGGGAATT GTCCAAACGAATGTTGCAAGGGATCTTCCAAAATATCTTCAAGCTGGTTATCGTTTGATACCATACTTCATTTTTAATGCTCAAGAAGGTTCTAGGAGTA CCCTATTTGCTGCCACTGATCCTCAAATATCAGAGTATTGTGAATTGTTGAAAGCAGATGAGTGGCCTGTCTGTGCCTTTATTTCTCAAGAATGTCGTCC AGCGAATCCATCAGAAGAAGCGCATAACCTTCAAACATCATATGAAGTATGGGAGAAGACATTAGAGATGATTGGCCTTCCTTCGGATGCTGTGGAGAAG CTTATAGAGGGAGAAGATGTTAAATGTCGTTATGGCCAAGAACAGAAGTCTAAGAATGATGACAGCAGAAAACTTGATTAGCTGCATTGTCCCCCACATG CCTCTCCCCTTAATTATGTGCAAGGGTATTTTCATTATTTATAGCAAGTAACAACCATTTCACTCTGAATTTGTGGGACAAGATTGATAATGCCTACAAC TTAGGTACTATCACATGATTTTTTAGGGGATGTTTACAAATCCGATTTTTCTATGTATGTATCCATCTTAATGACATTGGCCAACTACCACTTGCTTCTA ATGGGTAGTTTTAGCTATAAACTAGTGATATATGACTTTGTAGTTGAGTTTGTAATGGTCATTTGTAGGAGCATGAACAAATTAGAACTGTGTTGTTTAG TTATTTTGAGTTTTTGACCATGCTATTGATGACTCCTTTTCATGCCATCTTACTAGTGTTTCTGTCCATTTGAGAATTTGCTACCATGATTCTTGCCCCT CTGTTTTGCCTGCACCACTGATGCCATGACGTCATTGTCCGCTTGCCGGAATCACAACCTAGCCACACCCCCTAACATCACTATTGTGGGACATGTAAAG TACCAGATTTGTTCTGTTCAATGGTAAAGCTGCTGCATTCTCAAGGAAGAGCTTTGAACCATATGAAAGCTAGGACTGTGAAGCGGCGGCTATAGAATGG TTATAAAAGTTGCATTTTGAGATCCAACACCCACGACAATGATGGTGAGGGAAAATGGCAGTAGAGAGTGAAGGGCTAAGTGGCAAATGATTTGATTTCT GGTGGTGGCGATGTTTTTGGATGGTTGGTGTGGTTGTTTATAGGTTGAGGATGGAAGCCGGAGGTAGTTGACCGGGAAAATGGCATAGATACCATAGTAG TGGTGGTGGCAATGGGTGGTGTGAGAGTAGATGGTGGTCACCCAAATTATCACGTATGCATGCATGCTCAACTCTCTTTAGAATGTACTAACAATGACTT CAATTTGTTTTATGTTATAATAAAAAAGTCATTGGATCATTAGACATTGTTGAACAATTACTATTCTCTTCTTTGCAGTGTTTGTTTCTCTTCTTTTCAA ATGAAAAACAAAG
• Tissue: pods
• Gene name: LI_gene_149018;
• Additional information: details;

Expression of Ll_transcript_371989

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.1
• PS2: 0.4
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371989

• Blastp: Retinol dehydrogenase 11 from Homo with 28.39% of identity
• Blastx: WW domain-containing oxidoreductase from Homo with 45.71% of identity
• Eggnog: Dehydrogenase reductase(COG1028)
• Kegg: Link to kegg annotations (51109)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431398.1)
• Pfam: short chain dehydrogenase (PF00106.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;