| Id Trinity | TRINITY_DN47020_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_371991 |
| Sequence | GCTAAAAAGAAACAAAGAAAAAAAAAAAGATTTAACAAAGAATTATACAGAATGAAATCATAAAAAAACATGTATCATGTTCCTAAATTTGTTTAATTTT GGGACTTCGCAACAAGTCACTACCACTACATTACTCGCGCACTACTAAAAAAGACAGATCTCGCATATTCTACGCTAACACACATAGAAAAACATAGAGA TGCCAACGCCGTCGTCTTCAAGCGGCAACAATGAAGCATCGAAGAAGAAACAGTGTTTGGGTTGGATAGAATGGTTCAGAGGTTGGTTCTATCTCATCTA CGAAATGTTGTTTCAGCGAATCATGGCAAGTCACTTGGATAATCCTATGCCTCTACCTCCAATCAATGATCTCACTTGCATTGTAACCGGATCCACCAGT GGCATAGGCCTTGAAATTGCAAGGCAATTGGCACAAGCAGGGGCTCATGTTGTTATGGCAGTGAGGAATACAAAAGCAGCTCAGGAATTGATCCAGAAGT GGTCGATCGATGCTGCCGGGTTGGGTATTACCCTCAATATCGAGGTGATGGCTGTTGACCTTCTCTCATTGGATTCTGTAGCAAGGTTTGCTGAAGCATG GAATGCACGATCAGCACCATTGCACGTTCTCATTAATAATGCTGGAATTTTTTCCATCAGAGAGCCACAGAAATTTTCGAAAGATGGTTATGAAGAACAC TTGCAAGTGAATCATCTTGCTCCTGCTTTGCTTTCAGTACTCCTGTTGCCATCCCTTATTCGGGGTTCTCCTAGTCGAATTGTTAATGTGAATTCCATCG TAAGTCTCTTGCTATCTGAAAACTAAGATATGTACCTAGGATGTGAGGCTGGCACATCAAAGTTTCCTTTCTTCTATTTTAAATCAACTTGTATGTATGA ACCTTTGAAAACTTGTTGCTTTTCCAAGATGTTCGTTTGATACATTCAACATGGATTGCTTGTTTTTACGCCATATCTTATGAAAGAAAAAATTCATCAA CACAGAGAAAGTGATTACAAAGAGTTGGGAGTATAAGAGATCCTCCTTTAACTGTCGGAAACTTTATAAAAGGAAACATACCATACAAGTAATTAGTGTG AGGAATACAGGCTATGGGTTGATATTTGACATGTATTTAATATTCTTTGTAATATTGTTATTTTGTTTAACTCTTTATATTTACTGATGAGTGTTGATAT TGCTTTACAGTTAACATTATAGTGAAATAATTATTCCGAGAAAATTGAAAATATTATTTATAGTGATTGATTTCAGCGTGTTTTAATCTCACATTCTTTT ACCCTCATAATCTTAAGAGTGCTTCGTCTTTTCTTCGCCCCATTTCTTTCCCTGTAGATGCATCATGTCGGCTTTGTTGATGCTGAAGACATGAATCTCA CATCTGGAAAAAGAAAATATTCTAGTGTGATTGGGTATTCAAACAGCAAGCTGGCACAGGTTATGTTTAGTAGTGTTCTTCATAAGCGACTCCCTGGGGA ATCTGGCGTCAGTGTATTGTGTGTGTCACCGGGAATTGTCCAAACGAATGTTGCAAGGGATCTTCCAAAATATCTTCAAGCTGGTTATCGTTTGATACCA TACTTCATTTTTAATGCTCAAGAAGGTTCTAGGAGTACCCTATTTGCTGCCACTGATCCTCAAATATCAGAGTATTGTGAATTGTTGAAAGCAGATGAGT GGCCTGTCTGTGCCTTTATTTCTCAAGAATGTCGTCCAGCGAATCCATCAGAAGAAGCGCATAACCTTCAAACATCATATGAAGTATGGGAGAAGACATT AGAGATGATTGGCCTTCCTTCGGATGCTGTGGAGAAGCTTATAGAGGGAGAAGATGTTAAATGTCGTTATGGCCAAGAACAGAAGTCTAAGAATGATGAC AGCAGAAAACTTGATTAGCTGCATTGTCCCCCACATGCCTCTCCCCTTAATTATGTGCAAGGGTATTTTCATTATTTATAGCAAGTAACAACCATTTCAC TCTGAATTTGTGGGACAAGATTGATAATGCCTACAACTTAGGTACTATCACATGATTTTTTAGGGGATGTTTACAAATCCGATTTTTCTATGTATGTATC CATCTTAATGACATTGGCCAACTACCACTTGCTTCTAATGGGTAGTTTTAGCTATAAACTAGTGATATATGACTTTGTAGTTGAGTTTGTAATGGTCATT TGTAGGAGCATGAACAAATTAGAACTGTGTTGTTTAGTTATTTTGAGTTTTTGACCATGCTATTGATGACTCCTTTTCATGCCATCTTACTAGTGTTTCT GTCCATTTGAGAATTTGCTACCATGATTCTTGCCCCTCTGTTTTGCCTGCACCACTGATGCCATGACGTCATTGTCCGCTTGCCGGAATCACAACCTAGC CACACCCCCTAACATCACTATTGTGGGACATGTAAAGTACCAGATTTGTTCTGTTCAATGGTAAAGCTGCTGCATTCTCAAGGAAGAGCTTTGAACCATA TGAAAGCTAGGACTGTGAAGCGGCGGCTATAGAATGGTTATAAAAGTTGCATTTTGAGATCCAACACCCACGACAATGATGGTGAGGGAAAATGGCAGTA GAGAGTGAAGGGCTAAGTGGCAAATGATTTGATTTCTGGTGGTGGCGATGTTTTTGGATGGTTGGTGTGGTTGTTTATAGGTTGAGGATGGAAGCCGGAG GTAGTTGACCGGGAAAATGGCATAGATACCATAGTAGTGGTGGTGGCAATGGGTGGTGTGAGAGTAGATGGTGGTCACCCAAATTATCACGTATGCATGC ATGCTCAACTCTCTTTAGAATGTACTAACAATGACTTCAATTTGTTTTATGTTATAATAAAAAAGTCATTGGATCATTAGACATTGTTGAACAATTACTA TTCTCTTCTTTGCAGTGTTTGTTTCTCTTCTTTTCAAATGAAAAACAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149018; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371991
| Blastp | Retinol dehydrogenase 11 from Homo with 28.39% of identity |
|---|---|
| Blastx | Dehydrogenase/reductase SDR family member on chromosome X from Homo with 37.06% of identity |
| Eggnog | Dehydrogenase reductase(COG1028) |
| Kegg | Link to kegg annotations (51109) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431398.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |