Ll_transcript_371507

• Id Trinity: TRINITY_DN47022_c4_g2_i1
• Name Transcript: Ll_transcript_371507
• Sequence: TGAAGTTGTGTCACAATGAAAACCATTATTCCAACACATTCACTTCAACAACTTATTCTTCTTCTTTCATGCAAACACTTAAACCTTCTCTACCAAATCC ATGCCCATTTCATTGTTTCAGGTTTCCATCAACAACATCATCATTCCACACTTACCCATCTCATCAATTCATATTCTTTCTATCACAATTGCACTTTCCC ACAATCAATTTTCAATTCCATCAAAAACCCATCTTTGCTTTTGTGTAATTCAATCATTAGAGCTTATTCTAGACATAACAAGTTCAAGGAAGCTATAAAC TTGTACCATAGGATGATGGAAAATGGGGTTGAACCAGACAAGTATACATTTACTTTTGTTTTAAAGGCTTGTAATGATTCTTTGGATTTTAATGAGGGTG TGAGAATTCACCATCATGTAGCTTCTAGGGAGTTAGAATGTGATGTGTTTATTGGGACTGGTCTTGTTCATATGTACTGTAAAATGGGTCACTGGGATAG TGCAAGAAAGGTGTTTGATAAAATTCCTGTGAAGGATATTGCTTCTTGGAATGCAATGATTTCAGGCTTATCTCAGAGTTCAAATCCTCGGGAAGCAATT GGAATGTTCCAGAGCATGCAGATGGAGGAGGGTGTTGAGCCTGACTCTGTCAGCATCTTGAACCTGGCCCCGGCTGTTTCTAAGTTAGAGGATATTGATT CTTGCAAGGCTATTCATGGTTTTGTAGTTAGGAGATGTATTTACAGTGGCGCAGTTTCAAATTCGTTGATCGATATGTACTCTAAATGTGCCGAGGTAAA TGTGGCTCGTCGGATTTTTAACAAAATGCGAGCTAAGGATTGTGTCTCGTGGGCAACAATGATTGCTGGATATGTACATCATGGTTGCTTCCTTGAGGTT CTTCAATTAGTTGATGAAATGAAACGGAAAAATGTTAATATGAATAAGGTATCACTTGTAAATGCCCTATTGGCAGCTGCAGAGATGAGAGACCTAGACA AAGGGAAGCAACTTAATGATTATGCTTCACGGCTAGGGATGATGTCAGATATTGTTGTTGCTACTCCTGTTGTGTGCATGTATGCAAAATGTGGTGAGTT GATGAAAGCTAAAGATTTGTTTGAGAGTCTTGAAGGAAGAGATCTAGTTGCTTGGTCTGCTTTTTTATCAGCTCTTGTCCAAGCAGGGTATGCCAGAGAA GCATTGTCGATATTTCAAGAGATGCAGAATGAAGGTCTCAAACCAGATAAAGTGACTCTGACAAGTCTTGTTTCTGCATGTGCAGAAGTTTCAAATCCAA GAATAGGTAAGGTTATGCATTGTTATGCTATTAAAGCAGATATTGAATCCGATATCTCGACAGTGACAACCCTTGTCACAATGTACACTAGATGTGGTTT CTTTGCATATGCTACGGCGCTATTCGATAGAATGGTCTATAAAGATGTTGTGGCATGGAATACTTTGATAAATGGGTTTACCAAATACGGTGACCCACAT CATGCATTGGAAATGTTCCACAGACTCCAATTAAGTGGGATTCAACCTAATAGAGGAACCATGGTGGGTTTGGTTTCAGCTTGCGCCCTTCTAGATGACC TAAATCTAGGAATCTGCTTTCACGGGAATATCATAAAGAGTGGGTTTGAATCTGACATTCATGTAAATGTTGCTCTAATAGATATGTATTGCAAATGTGG GAGCCTTTGTTCAGCGGAAAACTTGTTTCACTTAACCAAGCCTATAAAAGATGTGGTATCTTATAATGTGATGATTGCAGGGTACCTGCATAACAGATGT GCTGATGAAGCAATTTCCACTTTTAACCAGATGAAATCGGAAAATGTGAGGCCCAACTTAGTCACATTTGTGACGATCCTACCGGCATTATCATATTTGT CAAAATTAACAGAGGCCATGGTTTTCCATGCCTGCGTAATCCGAATGGGATTCATGTCTAGTACCCTTGTGGGAAACAGTCTGATAGATATGTATGCTAA ATGTGGGCAACTCAGTGATTCTGAAAGATGCTTTCAGGAGATGGAAAATAAAGACAGTATCTCATGGAATGCGATGCTTTCGTGTTATGCAATGCATGGC CAAGCTGATCGTGCCCTCGCTCTTTTTTCACTAATGCAAGAGACTCATGTCCATGTTGATTCTGTTTCTTTCCTTAGTGTATTATCCGCCTGCAGACATG CTGGTTTGATTCAAGAAGGAAGACACATTTTCCAGTCCATGTGTGAAGAACATCATTTTGAACCAAATATGGAACACTATGCGTGCATGGTTGATCTTTT CGGCCGAGCTGGTCTATTTGACGAAGTTTCAAGTTTAATTAGTAAAATGCCAACAGAACCTGATGCTCAAGTTTGGGGGGCCCTCCTTGGAGCATGCAAG ACTCATTCCAATGTGAAATTAGGAGAGTCTACCCTCCATCACCTTCTTAAACATGAACCCAGAAACCCAACTCATTACGTAGTTTTGTCGGATATATATG CACAATGTGGTAGGTGGATTGATGCCGGAACGACAAGGTCAAATATTAATGATCATGGGATGAAGAAAAGTCCTGGATATAGTTGGGTTGAACCTCAAAA ACAAGCGCCGTGCCTCTCGAGGAAGGATGCATCTACTTTTAAACAGCTTACTTACGAAGAGAGGACATAGACATGTGTCTGATCACAATTGAATATACGA ATTTGACAAACAGAGAAAAAGAATTGTTTCTGTATATTTGAAGTAGAAGGAATGCAATCAATTTTCTTTCTTTACAATTAGAAATATGAAAGAAGCCTAC AAGAATCACCAAGTTATATGATCATGTTTAAAAAAGGTACCCATTTACATTACTTTGGGATTGATTTGCTTCTGGAAGAATTATTGGTGAGCTAAAATAG AACTGTATAAAGATCTCTCACTCACTGTGTGGTGTAACTTTCTTGGTGTAATGGTGGCTTTTCGAACCAACACGCGGGACGAATGAACAACGAAACAGGG ATTGTTGGTTTTGAGCATGAAACAAAGCAGGGACACTGGTATAGGAGCTGTCTGAAGAAGCAACCATGTTTAGAAGAGGTTAAGAATGTATTGCACAGTT GAAAGTTCATTCTACATTGTTGAAAGTGATGTAGTTATATTCATTAATTTATTATAGAATTTATTCTTTGGCTAGGTTCTATTTTCAGTTCTCACTCTGT CAACCAATAAGAGATTTAGCTCTAGCATAACGGTAAAGTTGTTTGTTTCGTGACTTGGAGGTTGTGTTCAAATCCTAAATACAGTCATTTCGCTCGCGAA ATAAGGCTGGATGCATTTACCATTCTCGATACAATTCAAATTTATCTTAGTCGTTG
• Tissue: pods
• Gene name: LI_gene_149048;
• Additional information: details;

Expression of Ll_transcript_371507

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.4
• PS2: 0
• PS3: 0.1
• PW1: 0.4
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371507

• Blastp: Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 45.91% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 45.79% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G39620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452105.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;