Id Trinity | TRINITY_DN47026_c0_g1_i13 |
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Name Transcript | Ll_transcript_371933 |
Sequence | GTTCAACTGTTCCTCTCTCTCTCTGTGTGTCTCTTACACAGTCACACTTCACATCTCAATTTCATTCTACTAACAATGAATCCTTACTTTTTTGGAGCCA TTCTTCCTTTTCTTGTCACCTTCATCCTCCGCAACTCCAACGCTACCAAGCGCCGCCGCGGCGTCTCCGTTGACACCGCCGGCGATCCAGGCTTCGCTGT CCGAAATCAACGGTTCACTTCACCGGTTCAAACCTCGTGGGAAGGCGTGACTACACTCGCGGAGCTTTTCGAAGAGGCATGCAAGAAGCACAGCGAGCGG TTATTGTTTGGGACGAGGAAGCTGATATCGAGAGAGGTAGTGAAAGGCGAAGATGGTAGATCGTTCGAGAAAGTTGAATTAGGAGATTATGAGTGGTTGA CTTACGCTGATGCGTTTGAAGCTGTGTCCAGTTTCGCTTCTGGTTTGTCTAGATTGGGACACGTGAAGGAAGAGCGTGTGGCTATTTTTGCTGATACACG TGCGGAGTGGTTTATTGCATTGCAGGGGTGCTTCAGGAGAAATGTGACAGTTGTGACTATGTATGCATCGTTGGGAGAGGAAGCATTATGTCACTCATTG AATGAGACAGAGGTTACAACTGTAATTTGTGGAAAAAAAGAATTGAGTACACTTGTACGTATTAGTGGACAACTGGACTCAGTGAAACAAGTAATATGCA TGGATGATGATATCCCATCTGATGCCTCATCTATTGAACATGGCTGGACAATCACCTCCTTCGCTGATGTTAAGAGCCTTGGTAGAGAAAGTCCTGTTGA CGCTGATTTACCTCTTTCAGCGGATGTTGCAGTTATAATGTATACAAGTGGAAGTACGGGATTGCCTAAGGGTGTGATGATGACACATCGCAATGTCTTA GCAACAGTCTCTGCTGTTTTGACAATTGTTCCCAACCTTGGGAGCAAGGATATATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAGCAGCTG AGAATTTGATGGCAGCTGTTGGAAGTGCTATAGGATATGGATCTCCTTTGACTCTAACGGATACATCAAACAAGATTAAAAAAGGAACGAAGGGGGATGC TACTGTCCTGATGCCAACTTTAATGGCAGCTGTGCCAGCAATTCTTGATCGTGTGCGTGATGGAGTGTTCAAGAAGGTAAATGCCACAGGAGGATTGGCA AAGATGATGTTTGATTTAGCCTATGCACGTAGGTTGCGTGCAGTTAATGGTAGCTGGTTTGGAGCCTGGGGATTGGAGAAGGTTCTCTGGGATTTTCTTG TGTTTAAAAAGGTCCGAGCAATTCTGGGTGGTCGTATCCGTTTTATACTGTCCGGTGGTGCTCCTCTTTCTGCTGATACCCAGAGATTCATCAATATTTG TTTTGGTGCTCCAATAGGTCAAGGATATGGTCTTACAGAGACTTGCGCTGGTGGGACATTCTCTGATGTTGATGATACATCTGTTGGCCGGGTTGGACCA CCTCTTCCGTGCTCATTTGTTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAACTAAAGACTCACCAATGCCCCGTGGTGAAATTGTAATTGGTGGTC CAAATGTCACTCTTGGGTACTTCAAAAATGAAGAGAAGACAAAAGAATCATACAAGGTATAAAAGCTTCATTGTTCTGTTTTCCTTTTTCTTGGGGGAAG AAAGCCAAGGTGGGATAAGATATCACTTTTTGCTGTAATAATTCTGCATATTGAAGTTGAAACTTGTGGCTACTTTTTCTTCTTCTTCAATTACACATGT TTACTTTTGTATCTTCATTGCAAAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGACATAGGGAGGTTTCATGCAGATGGTTGCCTTGAAAT CATTGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTCAGCTCCTTTGTGGACAAT ATTATGTTGCACGCTGATCCATTTCATAGTTACTGTGTGGCACTTGTGGTGGTTTCTCAGTACACATTGGAAGATTGGGCTAAAAAGCAAGGAATTGCTT ATTCGGATCTTCCAGAACTGTGTAAGAAAGAAGAAACTGTGAAAGAGGTGCATGCATCACTTTTAAAGGTGTGCCTCTCTTTTCAAAACCCTCTTAGTTC CCTGCTAGTTCTAACAAGTAATACCTCTTGGCTCCTCAGTCCGTGCAAGGAAAAGGCTGTATCCGGGATATGAACCCGTGACATCCAGGTGACAAGGCAA CAAACCTTATAGCCTCACGTTGCACCAAGGGTTACTATCACTCCCAATTTCTGATATGCATAAACTTTTTGAATATTCATCTAGAGAGCCCTTGCAGGGT GTAAAGTGTTGCCTTTAACGCTGTAAATAATGTACTATAATTCTTTTCTTATTAATTATAATCTATAAAACTATTTGCAGGAGGGAAAGAAGGCTCGGTT AGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCTGAACCGTGGACTCCCGAGTCTGGCCTAGTCACTGCTGCTCTCAAGCTCAAGAGAGAGGCC ATTAGAAAGTTTTTTCATACAGAACTTTTGGAGTTATATGCTTCTTAGTCTAACGAGCAAACTTGGATGTGGATGTGTTTACTCATCCCAGTTAAAGAAG CCACTGATCATTTTATGCTTTTCTGGTTTAATTGTTTCTTTTTTTTTCCTGGCCTGGGGAAAGGTTTTGTATTTTTATTTCCCAGTTATTCTTTTGCATG TTAAGTTACATAATACACTCATCATGCTTAAGTTATAAACAGCTGATGGCCAAAAGAATGAATATGCCTACAAGTGATGATGGGATGTGAACTATACTGT ACCTTTGTTTTTTGGAGATAAGCCAATACCATTTTCACATCATTTTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_149081; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371933
Blastp | Long chain acyl-CoA synthetase 9, chloroplastic from Arabidopsis with 74.24% of identity |
---|---|
Blastx | Long chain acyl-CoA synthetase 9, chloroplastic from Arabidopsis with 74.24% of identity |
Eggnog | Amp-dependent synthetase and ligase(COG1022) |
Kegg | Link to kegg annotations (AT1G77590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460583.1) |
Pfam | AMP-binding enzyme (PF00501.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |