Ll_transcript_373285

• Id Trinity: TRINITY_DN47031_c1_g3_i7
• Name Transcript: Ll_transcript_373285
• Sequence: GAGAGAGAGAGTGCAGAACAGAGGTTGTGTTTGAGAAAGTGAGAAGAAGAGAAAATGGAGATTTCTCCACAAACAACAAATCAAAGTGATAATGTAGTAA TGAAGAAGAAAGAGACAAGAGGAAGAAAACCAAAACCCAAAGATGATCAACAACAAACAAAAAAGAAACAACAACATCAACAAGAACATGAACCTACGGT GGATGAAAAATACACACAATGGAAGTCCCTTGTTCCTGTTCTTTATGATTGGCTCGCTAACCATAACCTTGTTTGGCCTTCTCTCTCTTGCAGGTGGGGT CCTCAACTTGAACAAGCTACTTACAAGAATCGCCAGCGTCTCTACCTTTCTGAGCAGACTGATGGTAGTGTGCCGAATACTTTGGTCATTGCAAATTGCG AGGTTGTTAAGCCTAGGGTTGCAGCGGCAGAGCACATTTGTCAGTTTAATGAAGAGGCGCGTTCCCCATTTGTTAAGAAGTACAAGACCATCATACATCC AGGAGAGGTGAACAGAATTAGGGAACTGCCACAAAATTCTAAGATAGTGGCTACTCATACTGACAGCCCTGATGTCCTGATTTGGGATGTTGAAAGTCAA CCTAACCGCCATGCTGTCCTTGGAGCTGCAAACTCTCGTCCAGATTTGATACTAACTGGACACCAAGATAATGCAGAATTCGCTCTTGCAATGTGCCCAA CTGAGCCTTATGTTCTTTCAGGAGGAAAGGATAAATCGGTGGTGTTGTGGAGCATTGCGGACCATATAACTTCTGCTGCAGACCCCACATCTGGTGGCTC AATTATCAAGCAGGACTCCAAATCTGGGGAAGGCAATGATAAATCTGCTGATTCCCCATCTCTTGGACCTAGAGGTGTCTACTACGGACACGATGATACT GTTGAAGATGTGGCTTTCTGCCCTTCTAGTGCACAAGAGTTCTGTAGCGTTGGCGATGATTCTTGTCTTATATTATGGGATGCCCGTGTTGGCTCTAGTC CTGTGGTTAAGGTTGAAAAAGCTCATAATGCTGATCTTCATTGTGTTGATTGGAATCCACATGATGTTAATCTGATTCTTACTGGGTCGGCTGATAATTC TGTTTGCATGTTCGATCGCCGCAAACTCACCTCTGATGGAGTGGGATCTCCTATCCATAAATTTGAGGGTCACAAAGCTGCTGTTCTTTGTGTTCAGTGG TCTCCAGACAAATCATCTGTATTTGGAAGTTCAGCCGAAGATGGTCTCTTAAACCTGTGGGACTATGAGAAGATTGGTAAGAAGATAGAGCGATCCGGAA AACGTGCTCCTCCAGGATTGTTTTTCCAACATGCAGGTCATAGAGACAAAGTGGTTGACTTCCACTGGAATGCATCTGATCCATGGACTATTGTTAGTGT CTCCGATGACTGTCAAAGTACTAGTGGAGGGGGAACATTGCAGATTTGGCGCATCAGTGATTTGATCTACAGACCCGAAGATGAGGTTCTGGCAGAGCTG GAGAAATTCAAATCTCATGTGGTGGCTTGTGCTTCGAAGTCCGAAAAATGATATACTTGATGGACAATAAGTTATTTCTTGCTTATGCTGTGGACTATGG ATATCATTCTTGTTATGTTTATTTTATCTGTTAGCTATGGATGTTTCTTATCTTTTTGAAACCACCTACTTGTTGTTGAAGTAGGGAATGTTAGATTGCA ACATGTAGTGATGTGATTTGTGATTGTGTTCCTCAAATTAATATAATTCTAAGTACTATCTGTGAGCCTTGACATATTGGTCTGTTTCTCGGCCTTCGGA CGCTCGTGCATCGGTCGCCTTTTTTAAGCACTATTTGAAGAGCATGATCCTTGGCTCATATGCGGCTCCTCGCATGCCTATATGGTTGGGAAATTAGTGT GTGCACATTGCTCAAACTTCTAACCATTAAGGGTTTATTTGCAAGTTGGATTTTAGGAGGGAAAGGAAGACCTAGGAGTCATGAAATACAACTCGACTCG CCGACTGTGAAGGAGGGAAGGTAGAAGTGTTTTTCACAAACTTTCCCTCATATAGCTCCTTACAAAACATGCTTTTGAGTTGGCAAATGAGATTGTGTGA AGTTATTGCTGGATGATAGTACAATGCAAGCGGTTGGTAGTGTGAATCATAGTGCAATTATTAGTATCCATGAGTAATGGTAGTAGTATTAGAAAGTCTT TCCTCAAATTATGATACTTAAATTTCTCAACATGTTTAAAAGATTAGCTTTCA
• Tissue: pods
• Gene name: LI_gene_149124;
• Additional information: details;

Expression of Ll_transcript_373285

FPKM

• PAB: 3.9
• PNAB: 50.8
• PS1: 62.1
• PS2: 28.5
• PS3: 46.6
• PW1: 25.6
• PW2: 13.8
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373285

• Blastp: WD-40 repeat-containing protein MSI4 from Arabidopsis with 80.32% of identity
• Blastx: WD-40 repeat-containing protein MSI4 from Arabidopsis with 86.61% of identity
• Eggnog: retinoblastoma binding protein(ENOG410XNU9)
• Kegg: Link to kegg annotations (AT2G19520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415490.1)
• Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex (PF12265.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;