Ll_transcript_371673

• Id Trinity: TRINITY_DN47035_c3_g2_i4
• Name Transcript: Ll_transcript_371673
• Sequence: CAGCCATGCTAAAAATGGCCTCCGTTATTTCCATCTCCTTCTCCTTCAATCTCTATATTGAACCATTGAATTGCAACGATAGTTAAAGAAGAACGCATCA GAAAAAAAACGAACACAAACCAAAATGGTGCACAGCGCCTACGATTCCTTCGAGCTCCTCACTGATTGCCCTTCCAAGATCGAATCCATCGAATCCTACG GTTCCAAAATCCTCCTCGGCTGCTCCGACGGATCTCTCCGTATCTACGCGCCGTCGCAGCCTCCGCCGTTATCGCAACCGGAGGAGCTGAGGAAGGAGCC TTACGCGCTCGAGAGATGCGTGAGCGGCTTCGCGAAGAAGCCTCTCATTTCAATGCAGGTTGTGGAATCGAGGGAGCTGCTGTTGTCATTATCTGAATCC ATCGCGCTTCATAGGCTACCCAATTTTGAAGCTGTAGCGGTTATCACTAAGGCCAAAGGCGCCCATGTGTTTTGCTGGGACGAGGAAAGAGGGTTCTTGT GTTTCGCTAGGCAAAAACGGGTTTGTATTTTCAGACATGATGGTGGTAGAGGATTTGTGGAGGTGAAAGACTTTGGTGTTCCTGATGTGGTGAAGTCGAT GTGTTGGTGTGGTGATAATATATGCTTCGGGATTAGAAAGGAATATTTGATTTTAAATGCTGCAAATGGCGCATTATCTGAGGTTTTTACTTCTGGGAGA CTAGCACCCCCTTTAGTTGTCCCTGTTCCTTCTGGAGAACTGCTACTTGGGAAGGAGAACATTGGTGTATTTGTGGCTCAAAATGGGAAACTTCGTCCAG ATGGTAGGATTTGCTGGTCAGAGGCCCCAGCAGAAGTTGTAATGCAAAAGCCATATGCTATAGCACTACTGCCTAGATTTGTGGAGATTCGATCTCTCAG AGATCCATATTCACTGATACAAACAGTAGTTCTTCGAAATGTACGCCATCTTCGCCAAAGCAATAATTCTGTGATTCTTGCTTTAGATAATTCTATTCAT GGCCTCTTCCCAGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCCTCTGGCAACTTTGAAGAAGCCTTGTCATTGTGCAAAATCCTTCCACCTGAAG ATTCAAGTCTTCGTGCTGCAAAGGAGAGTTCAATTCACATAAGATATGCCCACTATCTTTTTGACAATGGCAGCTATGAAGAGGCAATGGAACATTTTCT GGCATCTCAAGTAGATATAACCCATGTGCTGTCTCTTTATCCATCAATTATCCTTCCAAAGACAACAACTATTGTTCATGACCAAGAGAAGTTGATGGAC ATTTATGGGGATTCTTTATATCTCTCCAGAGCTTCTTCGGGTGTATCAGATGATATGGAGTCCTCTTCAGGATCTCATTTGTCAGAACCTGATGAGAATG CAGCACTCGAGTCCAAAAAAATGAGCTATAATATTCTTATGGCTCTCATAAAGTTTTTGCAGAAGAAGAGGTACAGTGTTATTGAGAAGGCCACTGCAGA GGGAACCGAGGAAGTTGTTTTAGGCGCAGTAGAGGATAACATCTCATCCTATAATAGTAGTAGGTTTAAGAAACTAAACAAGGTCGGTGGTAGTGTACCT ATTAGTTCAAGAGCTCGGGAGATGGCTTCAATACTGGATACTGCTCTACTCCAAGCCTTCCTGCTTACTGGGCAAACTTCAGCGACTGAAGAATTACTGA AAGGTCTTAACTACTGTGATCTGAAAGTATGTGAAGAAATACTTCAGGAAGGCAGCTATCATGTTGCTTTACTAGAACTTTACAGTTGCAACTCAATGCA CCGGGATGCTCTTGAACTTGTTCACAAATTGGTGGAAGAGTCAAAGTCTGGCCAATCTGAGATTAAGCATAAGTTCAAGCCTGAGACCATCATTGAATAT CTCAAGCCGCTGTGTGGAACAGACCCCTTAGTTGTTTTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGCCCAACCCAAACTATTGATCTCTTTCTGTCCG GAAATATTCCAGCAGATATGGTGAACTCATATTTAAAGCAACATGCTCCAAACATGCAAGCCATGTACTTGGAGCTCATGCTTGCGATGAATGAGGATGC CATATCTGGAAATCTGCAAAATGAAATGGTAGACATCTATCTTTCCGAAGTACTTGATTGGCAAGCGGATTTAAGTGCTCAAGGGAAATGGGACGAAAAA GCTTACTCCCCAAAGAGGAAAAAATTATTGTCGGCCTTGGATAATATATCAGGATACAATCCAGAGGCTCTTCTGAAACGTCTTCCACTAGATGCTTTAT ACGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTAGCATTATCTTTGTATGTTCATAAGCTTCATGTTCCAGAACTGGCATTATCTTA TTGTGACCGGGTGTATGAGTATATGCTCAAGCCTTCTGGAAAATCTCCAACTAACATATACCTATTGCTTCTGCAAATCTATATGAATCCACAAAGGACA ACCAAGAGCCTTGAAAAGAGAATTACAAATCTATTATCCCCCCAGAAATCAATGATTTCAAGGGTTGTCAGTTCAAAAAAATTACTAAAAACCAGAAGCC GAGGGTCTAAGAAAATCGCTGCAATAGAGTTTGCAGAGGACACAAAAGCTAATTTGAGCAGCACTGATAGTGGCAAGAGTGACGCTGAGGAATTTATTGA GGAAGGAGGTGCTTCTATCATGCATGATGAGGTCCTAGATTTGTTGAGCCGTAGGTGGGATAGAATCAATGGAGCCCAGGCGCTTAAACTTTTACCTAGA GAGACTAAACTGCAGAATCTGATTCCATTTCTTGGACCCCTGCTGAGAAAATCTAGTGAAATGTACCGTAATTGCTCAGTGGTTAAAAGCTTGAGACAGA GTGAGAACCTTCAGGTGAAAGATGAACTCTACAATAAGAGAAAAACAGTTGTGAAGATAACCGGTGATAACATGTGTTCTCTGTGCAATAAGAAAATAGG GGCTAGTGTTTTTGCAATCTACCCCAATGGGAAAACTCTAGTGCACTTCAATTGTTTCAGGGATTCCCAAAGCATGAAAGCTGTAGCCAAAGGGTCTCCA TTGAGGAAGCCATTTTGATTGAAAAGTGATATCAATTGGTGGTTCTGTGAGCATTGCTTTACATACACATAGTAAGGTTGGTACTGTTAAAGTGTGATAT TTGTCTGCAATATCAGTTTGTTCACTTGGACAATCTTATTCATTTGGAGTGCAGAAGGGGAGCCATTTTTTCTCTCATTTTCCCTCTTACTGTTGAGAAA TAAGGTCACTATATAAATAATTGGAATCATCTAAAGATAGCTTCTTTAGCTTTTCTTTGCTTCTTTACTTGCATTATAGGTACTGATGAGGCAAATTTGA GATTTTCCCCAAGGTTTGAAATTTTATATAAATGCATTTCCCCTTGGATTCGTTGCATTTGGGTTCAGCTATCTCTAAACTAAATAGATAAGTTTTTCCA TTGCTTTAGTCTCATTGATCACGTGTAATCAATTGATAGTTTTCTCTCTCTCAAGGGCACAAGTTGAGGAGAGAGAAACAAAGAGACTTTCTTAGATTTT GTGAAATTTCTCTATATTTCAAAGCTAAGAGCTCAATATTTGGTGATATAAATAGTTGGTCCCAAAATTAGATAGAAGGTGGAGATTGTGTTAGACATTC TAAAGTTACTTAGTATCAAATTGTTGTCCAGAAACAATATGTTGTATTCCCC
• Tissue: pods
• Gene name: LI_gene_149160;
• Additional information: details;

Expression of Ll_transcript_371673

FPKM

• PAB: 0
• PNAB: 1.6
• PS1: 3.1
• PS2: 1.1
• PS3: 1.7
• PW1: 0
• PW2: 0.8
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371673

• Blastp: Vam6/Vps39-like protein from Mus with 27.49% of identity
• Blastx: Vam6/Vps39-like protein from Mus with 26.92% of identity
• Eggnog: beta receptor associated protein 1(ENOG410XNSX)
• Kegg: Link to kegg annotations (269338)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431559.1)
• Pfam: CNH domain (PF00780.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;