Ll_transcript_372531

• Id Trinity: TRINITY_DN47038_c2_g1_i1
• Name Transcript: Ll_transcript_372531
• Sequence: GTTAGATTCTGGGAAGCATACTTGTTCCTAAACCCCATAGGCAAAGAATACTCTGATTACACCTCAAAAAAGTGTAACCTTGGATACATTTTTCTCGTAA TATCACACCATATTTGGGTAAGAAGCTAATTTTTTTGGGTGTTTGACTATTCTCCCAAAAAGTGTGATTTATAAGAGTCGTTTTAGTCCAGTAGACCCTT ACACCACTATACCAAGGCCCCTACCGAGAAGAAAAAAATAGAAGAGGAGGAGAGAGGAACTATATAAGAGTATTGTGGTTGCATGTGAGACACTTTGACA GAAACCCCTGAATTTTGCTGTGCTGACTTGTTTGCTTTGCTTTGCTCTGCTCTGCTTTGCTTTGATTTGGTGAAGGATAGGTCTACAAAACAAAAACATC CTTAGTTTGTGTTTTATTGTGCAACAACACAATGTCTTCTTCCAATGTTGACACTGAGAGAGAGATTGTAAAGAGTCTTAGTGATTTGGGAAGGAACCTT CTCAAATCCATTGCTCTTCAACTTCAAGATAAGAACCTTCTTCAACTTCTCAATGAATTGGCGCTAGTGTTATCAACTATGGATCAAGCACCAACCGATC CAATTTCGAAATCACTTTTACCTTCAATGAAGGCATTGATTTCTGATGAGCTTTTGAGGCACACAAATGAGGATGTTAAAATTTCAGTTACATCTTGCAT CACTGAGATTGCAAGAATTACAGCGCCAGAAGTCCCTTTTCGCGATGAACTGATGAAGGAAATTTTCAAGCTTACAGTGTCAGCTTTCGAGAAACTGTCT CATGTATCTGGCCACTGTTATGAAAAAGTACTTTCGATAATTGATAATTTTGCGAACCTCCGATTATGCTTGGTCATGCTGGACCTTGGGTGTGATGACC TGGTTATTGAGATGTTTCAGCATTTCTTGACAAATATAAGGTCAAACCATCTACGCCATGTAATTGATTGCATGCAAAACATAATGACCACGGTCTTGAG TGAATCTGACGAAATTTCCTTAGATCTTCTAAGACCTCTATTACACAGTGTAAGAAATGAAAATCAGACTATTTCACCCATTTCTTGGACATTAGGGGAG AAAGTAATTACGAATTGTGCCATTAAGCTTAAGCCCTATCTCATGAAAGCAGTGGAGTCTTCAGGTCGAACTCTTGATGAGTATGCACAAATAGTTTCTA CTATTTGCCAGAATGGATTTGAATCCTCCAAACATGATCATTCAAATGGTTCTAAGGGGAAAGAGGTGATCATGGTTCATGAACCAGATATTACTTGTGT GATAGATGTCCTAGCTATGGATGATACTAAATTAAACATTAGAAGTGCCGGTGCCAGTGCTTCTACTAAGGATCCTGAAGTTATCAAAAAGTCTAGGTCA AAAAGGAAAAAGCATTCTGATCCTATCAATCACTCGAAAAGAAGCAACATAAAAACCGATCCAGAAAATTGCAATTTAGTGTCTGAGCAGGAGCCAAAAT CAGAAACTCGGCTGAACACTGTACCAAGGAAGAGAGATCGTAAGCAGAATTGTTTATTGAACGCAGGGGAAGGCTATGATGGCTCTTGCGTTTCTGAGGG AACAAAAACTGGAAAATCAGCTCTATCCAGAAAGGCTCATGGTAGCAGCTCTTCTTTTTCACCTTCTGAAAAACCTGCTTCTAGAAAGGGCAAGTTGCAG TCAAAGCCTAAAACTGCAAGTGAAGGTCTAGTTTCTAAGCCACTAAATGTGAACAAAGTAAAACCTGCGCAGTCCAGAAAGACGCATAATGTTGGCAGCA TTGTTCCATCTGATAAAAGTGCTGCTTCAAACAAGGTTAATGCACAGTCACAGCCTGAAGATATTAGGAAAGGTCATGGAGCTTCAAATTCTAAACCGAA GGCTGAAGAGAATACTTATGTTAATTCTCCTTTGACAAATGATAACATACCTCATGGAAGCCGCTCCAAAAGGGGACAGCGAAGGAAAAGAAATAGGACA GACAATCAAGATGTTGATTCTAAATCTGTGTCAAAATTAAAGGAAGGAAATTTGAATCCTCTGTTCGGAGAGACTGCTTCAAAATCTAATGGTGCTAGGA TGGAAAAGGAGCCAGAATCTGGGAAGGATGCTGAAGCAAAACCTAAGACATCCATCAGAATCAAATTTCCTGCTAAAAAACATGATAAGAAAACTGTTTT GGCTCCTGAATTGGCAGTTGCTGACATGGAAACTAAGGATTCTTGTGAGAATAGAGAAGATTCCAAATCCTCAGTAAGGCGAAAGAGAAATCAAACCACG CCATCTGAAACTCGTGAACTTGGTGACTCATTGGTCGGTAGTCGGATCAAGGTGTGGTGGCCAAAGGACAAAATGTTTTATGAAGGCGTTGTGGATTCGT ATGATCCTGTCAAAGGAAAGCATAAGATTCTGTATGCTGACGGTGAGGTGGAAATCTTAAACATGAAAAGGCAGCGCTGGGAGGTAATTGGTTCCGATGT TCCACCAGATGATGAACAAGGACATGCTCTTCATAAGCTTGCAGAGGCATCATATATAGCACAAAAAATCAAAGAAGAACCTGATTTGGAATCAGACAAG AGTAAAAGCATCAATGTCCGGTCCAGGGGTAGAACTTCTTCAAGCATCTCCAAATATTAATCTGCAAAATCTGCTATCAAATCTGTGGATTCTTCTTCTG CCGATAAACATCTGAATGATCTACCGAAAGCTGACGGTGTTAAAACCACTGGTGGGAAGCCTAAATCCACAAGAATGAAGACTGGTTATGTCTAGATTTG AAGGTTACATGTAACTAACTATTCTTAATGCATTGAATGTATGCAGTGTTTAGTAGTGCCAAGAGGTGGATTTAGAGCTTTTACTTTGGCTTTTCCATAG GAAACTATCAGTTTAGTCTCTTTTGGTTTCATATTTTATCTCAAGAACTTAGCATACAGGTCAAGCCTCCAAAACTCCTCTTTAGAATGGTTTGGTATAT TATGGAGTGAAAAACTATTTACTGCACTCCAAACCCATTTTTGAACATGGTTACTTGTATAAAATGACTTCAACTATTTGCAGTATATGGGTTAGTTTCA TTCCTAAAA
• Tissue: pods
• Gene name: LI_gene_149191;
• Additional information: details;

Expression of Ll_transcript_372531

FPKM

• PAB: 0
• PNAB: 2.7
• PS1: 4.2
• PS2: 6.6
• PS3: 3.8
• PW1: 2.8
• PW2: 1.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372531

• Blastp: Sister chromatid cohesion protein PDS5 homolog B-B from Xenopus with 23.12% of identity
• Blastx: Sister chromatid cohesion protein PDS5 homolog A-B from Xenopus with 27.07% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (495695)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433673.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;