Ll_transcript_372048

Id TrinityTRINITY_DN47041_c2_g2_i1
Name TranscriptLl_transcript_372048
SequenceGTTCAGACTAAGCTCATTCTTCGCTCTCTCTCAGTTCAATCACTTACTTTTACGATCACTTCTTCTTCTCACTACGTGCATCAAATTTTAAATTCTTTAT ATTTTTTCATGCTTTTGTTTATTTTACGAAAAAAATTATTCATTTTTCCTTATACAAAATATTCCCATGCAAGTGCATTCTAAGTGTTTGTTGTTATGCC CAAGTTATTTCTGCTATGAACAATCCCACACAAACTTTGCATAAAGTTTGCCCAACAATAAAAAAAAGAGGGTATTCAAAAGTGAAGGCGAGTCATGCTT ATTCCGTATGTCACCAAACTCCGATCTCGCCCTTCGATTTCATCCCCGCTTTTCGGCCTCTTTGTCTCGTATTTGCATACTAGTACCTTGTTTCGCTATG CGAAACCGGTCAATTGGAACATTACTCACAGTTTTGTTCGAAATAATCCACTCCTTTCTCTCTTAGAAAGATGCAAATCCTTGCACCAATTAAAGCAAAT CCAGGGGCAAATGGTTATAACAGGCTTGGTAGATGATAGCTTTGCCGCAAGTCGCCTCATTGCCTTCTGTGCTCTCTCCGAATCACGGAGTCTTGAGTAC TGCATGAAAATCTTGTATCATACACAAGAACCGAATGTCTTCTCGTGGAATGTGACAATGCGGGGGCATGTGGAAAGCGGGGACATAGAAGGAGCTCTTT TGTTGTACAAGAGAATGATGCGATGTGGTAGTTTGAAGCCAGATAGTCACACTTACCCTTTATTGCTTAAAGCTTGTTCTTGTCCATCTCTGAATTGTGT AGGTCTTACTATACTTGGACATGTGTTGAAATTTGGTTTTCAAATTTATTTATTTGTGCACAACGCGTTGATTAGTATGCTTCTCTCGTATGGACACTTA GAGGCAGCATATGATATGTTTAATAAAGGTTGTGTGAGAGACCTGGTAACTTGGAATTCCATCATTACTGGGTTTGTTAGAAGAGGATTAGCAAATGAGG CTGTAAAACTCTATCGGGAAATGGAAGCCGAGAAAGTGAAACCAGATGAGATTACAATGATTGGAGTGGTTTCTTCTTGTTCTCAGCTGCAAGATTTGAA TCTTGGAAGAGAATTTCATCGTTACATTGAAGAACATGGGATTGAGTTATCAGTTCCGCTTACTAATGCACTTATGGATATGTATGTCAAGTGCGGAGAC CTATTGGCTGCACGATTTCTATTTGATAACATGGCACAAAAGAGCCTTGTTTCATGGACTACAATGGTTTTAGGATATTCAAGATTCGGTTTTCTGGATG TTGCTCGTGAGCTTTTATTTAAAATTCCAGAGAAGAGTGTTGTTCCTTGGAATGCAATATTAAGTGGTTGTGTTCATGCCAAGAAAAGTAAAGAGGCATT GAACCTATTTCATGAAATGCAACTTAATAGCATAGAACCTGATAAAGTAACCATGGTTAATTGCTTGTGCGCGTGCTCACAACTTGGAGCTCTGGATGTA GGAATATGGATTCACCATTATATTGAAAGACACAATCTTTCTTTAGATGTTGCCATGGGAACTGCACTGGTTGACATGTATGCCAAGTGTGGAAATATTG CAAAGGCCGTTCAGGTTTTCGAAGAGATTCCTCAAAGAAATTGCTTGACCTGGACATCCATTATTTGTGGTTTAGCACTTCATGGGAATGCAGCAATGCT TTATCCTATTTCTCGAAAATGATTCATATTGGATTGATGCCTGACGAGATCACCTTTCTTGGTGTCTTATCAGCTTGTTGTCATGGAGGATTAGTTGGAG AAGGCCGCAAATATTTTTCCCAAATGAGCTCCAAGTTCAATATATCTCCTAAGCTTAAACACTACTCGTGCATGGTGGACCTCTTAGGAAGAGCCGGTCA TTTGGAGGAAGCAGAAGATCTTATTAAAAATATGCCCATGGCGCCTGATGCTGCTGTGTTGGGTGCTTTATTCTTTGCTTGTCGTGTTCATGGAAATGTT CTAATTGGAGAGAGGACAGCTTTCAGGCTTCTTGAGGTGGATCCTCATGATAGTGGAAACTATGTTCTGCTGGCTAGCATGTACAGTGAAGCTAAAATGT GGAAGGAGGCAAGGAGTGCAAGGAAAATGATGGAGGATAGAGGAGTAGAAAAGACTCCTGGTTGCAGCTCAATTGAGATCAATGGCATAGTGCATGGGTT TATCGTGAGAGATGCATCACATCCACTATCTGAACGGATTTACGAGTGTCTAGTTTCATTGGCAAAACAACTGGAGCTTCTAGGATTTACATCTAATTTT CCTGTTTATGGAGATGATCTTTTATCCTAAACTTGTCAATGTGTGTGCTATATCTGTGCTGTGCTAATTGAAGTATCCTCTCCCATGGAGAGCCTGGACC AACATTTAATCTATCCAGAGGCTTCTACCTTAGTAATTTTATGCGTATAACATGAAGCCACATCTCTCCAGTCCTGCATCCTTCCACCGATTTCAATCTT CTTTTGTCCTTTAATATTTAAATTCTTATTACAAACACTTCAAAAAAAACTCTTTATTGCAGAAGAAGGCATAGTAAGTTCTTTACAGTGACACTCCAGG AAAAATCTTAACAACCATAACACTCCCCTGAAAGTGTTTACCCAAGCAATGACCCGAATGTGGTTGATAGCCTTTACAGTGTTAAGAAACAAGCCCCTTC ACCAAAAAAGAAAAGAAAACGAAACAAGACCATTGCTGTCATATTTCAATGGTCTGTTACAGAACCAGGAATAACTATGGTAACCATGAGTCTGAAGAGT GAATTGTCTACATGATGCCCCACAAGAATAACAAATTTGGTGCATTTTGGAGATAATGTTGAGGTCGAGTATTGGACCTCTAATGGAAAATGACTTCAGG GTTGGCTCTTATACTTTTTTTTTGTAAGAAATGTTTGGGAGGAAGTTGACGTTGCCAATTTTGCCTTGACATTGATCAGACCAATTCAGAAGAGGAAGGT TGTGGTAGTGGCTATTATTACTTCCCTGGCTCTCATTCTTGGGTGGGAAGGTTGTGGCAGTAACTATATTGCAACTTATATCAACCAACACACAATGAAG GTCACCAGCGCACGTGGGATTGATGCAAAGTTGATAATAACAGATATTGCATTAGGACTCGGGAGGTGTCTAGCAGGATTGGTTGATGTTATGGTTGTGA ATCCACCTTATGTACCTACCTCTGCAGATGAAATCAGCGTTGAAGGTATTACCTCTTCTTGGGCTGGTGGGGAGGATGGCCGGAGTGTTATTGGTAGGGT TTTGCCTGTTTGTCAGAACAACTTTTGTCAGAAAAGGGATGGTTGTACATGGCCCCCCTCACAACAAACAATCCTTCTGAGGTATACATTCAAATGAGAA TTAAGGATATGCATCTAAGATTGTCATTCAAAGATCAACAGAGGAAGAAAGTCTCCATATCATAAAGTTCTGGCAGGATTTTGATACCGAAGTAGATGAC ATAATGGACCAATGTGCTTCTGGTTTGTGGGCTACTTGCTCAAATTCCTTTATTTCCATCCTCAAGAGGCAGCAATAGCAACAGGGGAACTTGTGCGTGC TTTAGGTGTTGTAGCATGTCCATCTCTTCTTGGTGTTCCGTTGGGACATAATTCATCATTCCTTCACGGCCTGCATTTGCACCTCCTCGTATTAGGGAGG CCATTTGGTGTGGTAGCACAAACTCGACAACTGAAGAAGAAACTGCGGCAAGGTGTTAAAGGAGTGTATATCTCTATAGATGTGGATTGTCTGGATCCTG CATTTGCTCCCGGAGTGTCTCACATAGAACCCAGAGGTCTTTCTTTTCGCGATGTTCTTAACATTCTCCACAATCTTGAAGGGGATGTTGTTGCTACAGA TGTTGTTGAATTCAACCCACAGCGCGATACTGTTGATGGAATGACTGC BLAST
Tissuepods
Gene nameLI_gene_149213; 
Additional informationdetails; 

Expression of Ll_transcript_372048

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_372048
BlastpPentatricopeptide repeat-containing protein At2g22410, mitochondrial from Arabidopsis with 57.27% of identity
BlastxPentatricopeptide repeat-containing protein At2g22410, mitochondrial from Arabidopsis with 57.27% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT2G22410)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447172.1)
PfamPPR repeat family (PF13041.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;