Ll_transcript_371570

• Id Trinity: TRINITY_DN47042_c0_g1_i16
• Name Transcript: Ll_transcript_371570
• Sequence: CCCACACACCCATAATTAGTTGAAAAATGTTTTTTAAATTAAAAGTTAATAATTAATTATTTATGATCAATCACGACCGATGACACATGTAATGATACAA GTTATGGGACATTACTAAGTTTTGTGTAACGTGGTTGGGGAGGAGAGGAAAGAAGATTAGAAGAGTAAAGTAAGGTGAGGTGACGTGGCATATCCATACC CAATAACAAAAACCCATCACTCCACACCTCTTCGACAAATCCCCAAATCTCATTCATTCATTAATTCATTCTCTCAATTTTTTCCAAATCCACTCTCACT TTCTCACAACTCACACCGTTCCTCTTTCTTTCCCTTTACTTTCATCAACGCCGCTTATAGATACTATAAGTTCGTTTATTAATGTCCTCCCACAGAAATA AGTGTAGCAGCAATATTGCAGCTAGGATTTTCGATCGTCAAATTCGCACTCCTCCTCCTGCCACTACTGTTCATTATGCCAGGCAATTCTATGAAAATTT GGTACCCAGTTACACGCTATATGAGGTTGAATGCCCAGACCATTCATTTCGTAAATTCACTGATGATGGTCAATACCTTATATCTTTCAGCAGAAATTTC CAAGACTTGATTGTTTATCGTCCTAGATGGCTTTCTTTTTCTTGCAAAGATGAAGATTGTGATAAACATGATTTGCCATCCAAAGCAAAGAGATTTGAGA GCTTTTTCACTCAATTATACTCTGTACCACTTGCTTCTTGCAATGAACGTATATGTAAAGATTTCTTTCTTTACATGGAGGGTAATCAGTTTGGACTCTT TGCCACTTCTACGGCCCAAATTCATGATGCACCTGCTGTTGGAGGAGCTATCCAGGGTGTCCCTTCAATTGAAAAGATAACTTTTATCCTCTTGAGATTG GAAGATGGAGTTATTCTTGATGATAAGGTCTTCTGTAATGACTTTGTTAATTTGACCCATAATATGGGTGTGTTCTTGTATGATGACCTGTTGGCAATTG TATCACTTCGCTATCAAATAATTCACATTCTCCAAATTAGAGACTCTGGGAACCTTGTTGATGTACGTGCTATTGGGGAATTCTGCCGTGAAGATGATCA ACTTTTTCTCAATTCAAATGCTCAGCATCAGTTGCCCGGGGGACACATAGAACATAACGTGCATCAAGGACAGCCTAATCCGGGGAATTCTTTTTTAAGT GGTATTAAGCAGCGATTGCTTTCGTTCATATTTCAGAGCATATGGAATGAAGAGAGAGATGATAACTTGAGGATTCAAACACTTAGGAAGAAATTTTACT TCCACTTTCAAGATTACGCTGATCTGATTATCTGGAAGGTGCAGTTCTTGGACCGACACCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGGGGTGTC ACGAAATGCTGATCACCACCCAGCTTTCGTTGCAGTATATAACATGGACACAACTGAAATAGTTTCTTTTTATCAGAATTCAGCAGACGAACTTTATCTG TTGTTCGAGCAGTTCTGTGACCACTTCCACGCAACATCAAGAAATTCAATGCATATGAATTTCATATCATCTCATTCAAATAATGTTCATGCACTGGAAC AACTACGGAGCATAAAAGATAAGGCTAGCAGCTCATCACAG
• Tissue: pods
• Gene name: LI_gene_149220;
• Additional information: details;

Expression of Ll_transcript_371570

FPKM

• PAB: 3.7
• PNAB: 2.2
• PS1: 2.4
• PS2: 0.6
• PS3: 0.8
• PW1: 1.2
• PW2: 1.6
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371570

• Blastp: Light-mediated development protein DET1 from Lycopersicon with 75.24% of identity
• Blastx: Light-mediated development protein DET1 from Lycopersicon with 75.24% of identity
• Eggnog: de-etiolated homolog 1 (Arabidopsis)(ENOG410XSK5)
• Kegg: Link to kegg annotations (778329)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444613.1)
• Pfam: De-etiolated protein 1 Det1 (PF09737.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;