| Id Trinity | TRINITY_DN47042_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_371557 |
| Sequence | CCCACACACCCATAATTAGTTGAAAAATGTTTTTTAAATTAAAAGTTAATAATTAATTATTTATGATCAATCACGACCGATGACACATGTAATGATACAA GTTATGGGACATTACTAAGTTTTGTGTAACGTGGTTGGGGAGGAGAGGAAAGAAGATTAGAAGAGTAAAGTAAGGTGAGGTGACGTGGCATATCCATACC CAATAACAAAAACCCATCACTCCACACCTCTTCGACAAATCCCCAAATCTCATTCATTCATTAATTCATTCTCTCAATTTTTTCCAAATCCACTCTCACT TTCTCACAACTCACACCGTTCCTCTTTCTTTCCCTTTACTTTCATCAACGCCGCTTATAGGTAACCACCTCACTCTTCTCTTTTTATGTATATATTTTTT GTTTCCCACTGGGCCCGTAGGCAATTCTGTCCGAGCCGAGGAAATCCACAGGTATGTGAGAAATATGTGCCACTTGAACCAACTCTCGTTGGTTTAATGT ATATTTAAGAATAGGAATAGGAATATAGTAAATGTTTTAGTATTAAAACCACCATTTATCTGATATCAAAATAATATACCATGTGTGCAGATACTATAAG TTCGTTTATTAATGTCCTCCCACAGAAATAAGTGTAGCAGCAATATTGCAGCTAGGATTTTCGATCGTCAAATTCGCACTCCTCCTCCTGCCACTACTGT GTCATTTAATCCTTGCAGGTTCATTATGCCAGGCAATTCTATGAAAATTTGGTACCCAGTTACACGCTATATGAGGTTGAATGCCCAGACCATTCATTTC GTAAATTCACTGATGATGGTCAATACCTTATATCTTTCAGCAGAAATTTCCAAGACTTGATTGTTTATCGTCCTAGATGGCTTTCTTTTTCTTGCAAAGA TGAAGATTGTGATAAACATGATTTGCCATCCAAAGCAAAGAGATTTGAGAGCTTTTTCACTCAATTATACTCTGTACCACTTGCTTCTTGCAATGAACGT ATATGTAAAGATTTCTTTCTTTACATGGAGGGTAATCAGTTTGGACTCTTTGCCACTTCTACGGCCCAAATTCATGATGCACCTGCTGTTGGAGGAGCTA TCCAGGGTGTCCCTTCAATTGAAAAGATAACTTTTATCCTCTTGAGATTGGAAGATGGAGTTATTCTTGATGATAAGGTCTTCTGTAATGACTTTGTTAA TTTGACCCATAATATGGGTGTGTTCTTGTATGATGACCTGTTGGCAATTGTATCACTTCGCTATCAAATAATTCACATTCTCCAAATTAGAGACTCTGGG AACCTTGTTGATGTACGTGCTATTGGGGAATTCTGCCGTGAAGATGATCAACTTTTTCTCAATTCAAATGCTCAGCATCAGTTGCCCGGGGGACACATAG AACATAACGTGCATCAAGGACAGCCTAATCCGGGGAATTCTTTTTTAAGTGGTATTAAGCAGCGATTGCTTTCGTTCATATTTCAGAGCATATGGAATGA AGAGAGAGATGATAACTTGAGGATTCAAACACTTAGGAAGAAATTTTACTTCCACTTTCAAGATTACGCTGATCTGATTATCTGGAAGTCATGTAACAAG TTGCATGCGTTCAACTCCTGGACAGGTGCAGTTCTTGGACCGACACCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149220; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371557
| Blastp | Light-mediated development protein DET1 from Lycopersicon with 73.94% of identity |
|---|---|
| Blastx | Light-mediated development protein DET1 from Lycopersicon with 75.52% of identity |
| Eggnog | de-etiolated homolog 1 (Arabidopsis)(ENOG410XSK5) |
| Kegg | Link to kegg annotations (778329) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444613.1) |
| Pfam | De-etiolated protein 1 Det1 (PF09737.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |