Ll_transcript_371560

• Id Trinity: TRINITY_DN47042_c0_g1_i6
• Name Transcript: Ll_transcript_371560
• Sequence: CCCACACACCCATAATTAGTTGAAAAATGTTTTTTAAATTAAAAGTTAATAATTAATTATTTATGATCAATCACGACCGATGACACATGTAATGATACAA GTTATGGGACATTACTAAGTTTTGTGTAACGTGGTTGGGGAGGAGAGGAAAGAAGATTAGAAGAGTAAAGTAAGGTGAGGTGACGTGGCATATCCATACC CAATAACAAAAACCCATCACTCCACACCTCTTCGACAAATCCCCAAATCTCATTCATTCATTAATTCATTCTCTCAATTTTTTCCAAATCCACTCTCACT TTCTCACAACTCACACCGTTCCTCTTTCTTTCCCTTTACTTTCATCAACGCCGCTTATAGATACTATAAGTTCGTTTATTAATGTCCTCCCACAGAAATA AGTGTAGCAGCAATATTGCAGCTAGGATTTTCGATCGTCAAATTCGCACTCCTCCTCCTGCCACTACTGTGTCATTTAATCCTTGCAGGTTCATTATGCC AGGCAATTCTATGAAAATTTGGTACCCAGTTACACGCTATATGAGGTTGAATGCCCAGACCATTCATTTCGTAAATTCACTGATGATGGTCAATACCTTA TATCTTTCAGCAGAAATTTCCAAGACTTGATTGTTTATCGTCCTAGATGGCTTTCTTTTTCTTGCAAAGATGAAGATTGTGATAAACATGATTTGCCATC CAAAGCAAAGAGATTTGAGAGCTTTTTCACTCAATTATACTCTGTACCACTTGCTTCTTGCAATGAACGTATATGTAAAGATTTCTTTCTTTACATGGAG GGTAATCAGTTTGGACTCTTTGCCACTTCTACGGCCCAAATTCATGATGCACCTGCTGTTGGAGGAGCTATCCAGGGTGTCCCTTCAATTGAAAAGATAA CTTTTATCCTCTTGAGATTGGAAGATGGAGTTATTCTTGATGATAAGGTCTTCTGTAATGACTTTGTTAATTTGACCCATAATATGGGTGTGTTCTTGTA TGATGACCTGTTGGCAATTGTATCACTTCGCTATCAAATAATTCACATTCTCCAAATTAGAGACTCTGGGAACCTTGTTGATGTACGTGCTATTGGGGAA TTCTGCCGTGAAGATGATCAACTTTTTCTCAATTCAAATGCTCAGGTCAGCGCTTTTTATTTCAAACTTTTGGTTTGACTTCATTCGACTAGTGTTTTGC TGTGTGTGCCATTAGATGAATTGTGGGTTCTGGGGAGAAAACTCCATATATTTTATCGAATTAAGTATTCTTTTTAGAAGGTTTAGGGTTTAAAATCACA GGTGCATATGGTTAACATCTTGGAAATGCATTTCAAATCTGTTACCGTGGTTCAAAACTAATAATTTTGTGGTCTTGCATGATTGTCATTCATCTTAATC ATCCTTTACTGATTGTCAAATCATCGAGTTCAATTTTCATATATAACTTTATACTATTCTGCATGTCAACCAAAATTCTATCCGTAGTAGCTTTTATCAA GTACTTTCACATAATGTTTTGATGGTTTTGTGGCGTAAAAGACAGTCATTTGCTGACAGGGCAATGCATTTTCTGACAAAAATAAACAGCATCAGTTGCC CGGGGGACACATAGAACATAACGTGCATCAAGGACAGCCTAATCCGGGGAATTCTTTTTTAAGTGGTATTAAGCAGCGATTGCTTTCGTTCATATTTCAG AGCATATGGAATGAAGAGAGAGATGATAACTTGAGGATTCAAACACTTAGGAAGAAATTTTACTTCCACTTTCAAGATTACGCTGATCTGATTATCTGGA AGTCATGTAACAAGTTGCATGCGTTCAACTCCTGGACAGGTGCAGTTCTTGGACCGACACCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGGG
• Tissue: pods
• Gene name: LI_gene_149220;
• Additional information: details;

Expression of Ll_transcript_371560

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371560

• Blastp: Light-mediated development protein DET1 from Lycopersicon with 83.9% of identity
• Blastx: Light-mediated development protein DET1 from Lycopersicon with 81.36% of identity
• Eggnog: de-etiolated homolog 1 (Arabidopsis)(ENOG410XSK5)
• Kegg: Link to kegg annotations (778329)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444612.1)
• Pfam: De-etiolated protein 1 Det1 (PF09737.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;