| Id Trinity | TRINITY_DN47049_c5_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_372935 |
| Sequence | AATTGGTGGAGAAACAAAGAGTGCATAGTGTTGTTTGGTTATCCAGAAGTTGAGTCCAAATGGAAAATTCAAAGAAGTTTGTTGAAGGTGAAGTTATCTA CAAAAAATCACAAGAACTAGAAGATGAAGAAGCCTTTTCATATGCAACACAACTTGGATTCTCAACAGTTCTATCTATGTCACTGCAATCAGCATTTGAG CTTGGTGTTTTTGACATCTTACAAAAAGCTGGTCCAAATGCACAGCTTTCTGCTAACCAGATTGCATCACAGCTTTCTTGTAACAATCCAGAAGCAGCTT CTATGTTAGATCGTGTTCTTGCTCTTTTTGCATCTCATGATATACTTAAGTGTAGTCTCATTCCTCTTCATCAAAACCTTGGATCTTTTCAGAGGCTGTA TAGTATGGCTCCTGTGGCTAAATTCTTTGCAAGTGATTCTGATGGTTTTTCATTAGGACCATTGATGGCTTTGATTCAAGATAATGTCTTCTTAAAAAGC TGGTTAGTACTTTTCTGTCTGTTTCTCATCACTAATTTATCTCCTTTTTTATTATAAAACTGGAATGTTTTTGAAGAAATGGAACCTTACATAACAATTT ACTGCAATGGATTGAAAGCCAGAGTTAAAGGTGTGTTCTTGTTCTTGTCCAAACTAAGATTTAGATGGTGCATAGGAATGAATAGATTCATACATCTGAA GCTTAATCTTGTATTTATAAAGTGCTTATCAAAATGGGAATAAATGATGATAGGGCTGAAAACAAACCGAACTGAGTTGAATTAGAGTTCAGCTTGGTTC AGTTTGATAAGGATTGACTTAGCTTGAAACTCAACTTGAGTTCAATACAAGTTATTTGTTTAGCTCGAGTTCGGATTGGTTAAAGTTTGTGAACTGTTCG GTTCAGTTCGAATGATTCATTTGGACAACTCAAGTAATTAATTAAAATTTGAAAAATAATACAAATTCTTTTATATATATAAATATAATATTGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149288; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372935
| Blastp | Caffeic acid 3-O-methyltransferase 1 from Populus with 47.37% of identity |
|---|---|
| Blastx | Caffeic acid 3-O-methyltransferase 1 from Populus with 47.37% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440464.1) |
| Pfam | Dimerisation domain (PF08100.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |