Ll_transcript_373127

• Id Trinity: TRINITY_DN47050_c4_g8_i3
• Name Transcript: Ll_transcript_373127
• Sequence: ATACAAATCAACTTTTGTTTCACACAAAAGTTATGTGAAGGGTTTCATTCCGTTGTTTCTTATAATTAGTTTCTTATATATAAGACATATTTGTCTTTAC ATCAACTTAACTTAATCCTATAGTTATGTCTTCTCAAGTACGTGATCAACAGTGCCGTAGCTTACACTTTTTCAAGGTTATTCTTGAAAGCAACATTCGA GATGGAGAACTGGTATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATATGCAGAGTGGGTCGATCTTTTTTGGCATAACCTGTAGGAGTATAGTA ATATGGGAATGTTTCAGGTTATTAGGTTTTCACATAAATCTAGTTCATAACTATTTTAGTCATACCAAATGAAATAGTAGATATATTAATTAACCCTGTA TCGCATTTTTTGTTGTCTATATTTGATTTTTATACAGTATTAGGGAGAAAGTAGTGTTGTTACTATTTTTGTATGTTTTTTAAATTTTGATTTATAGTAA TTATTGACAATTGTGGAAAAATGCGGCTGATGAAATCGCTACAATGAAATTGTAGATTTCCAGAACCATGTTTTTGCGGTCACTATTAAGGTTTTGGATC ACAATTTAAAACTTTTCTGCTGTGTTTATGTTGTTAATGTTGAATGTTAATTGAAAGAAGTTTGTGACAGAGGGTGCCAAAAGTTTTTGTGAAGAGATGC TGGCAAGAAATAACAAATCCAGTTTTTCTAAGGCTTCCAAATGGCACTGAAAGGAGAGTTTATTGGATTAAAAAAGATGGTGATGTTTGGTTTTCCAATG GTTGGAAAGAATTTGCACAATACTTGTCATTGGAAGTGTCACAGTTTCTGGTGTTTCGATATGAAGGAAAATCTCGATTCCATGTTATCGTATTTGGAAA AAGCGCATTAGAAATAAAGTACCCTATACCAGAAGATGAAGAGGTTAGCAATGACAGTGATTACTCCTTGAAAATTATTGATGATTTTGATATGATTAAC TGTAAAAGGCACAAATCTCCAAAACCATTTTCTCAAGCTCCTAAGAAGATGAAAATCAACCCAAAGGAAGAACATGAATACTATTCCAGCCATGCTAAAA CTAGGCTTGAGAAGTGGAAATCCCATAATGCAGGTCTTAGTAATGCTAAGAACAATGGGGAAAGTAGCAGAGATCTTGGTGAGAGAATCAATGCTTTCCA CAAGCAAGTGAACCAAATTTTCTACTCTGAGAATTGTTGGTTTGCATGTACACTACAGAAAACATACCTACAAAGAGATTTCTTGGCCCTACCAAAAGAT TTTGCTAGAACAAATCTGCAGAAGAAGGAAGGAGAAGCTACCCTTTCTTTCATGAAGGATGGTAAGGGCAGAACCTGGGATGTGATGATAAAGCACTATT CCTGCAATAAACAATCAGCATTTATTAGTGGTTGGATTAATTTTGTGGAGGACAATAATTTGAAAATAGGTGATGTTTGTGTCTTTGTGCTAAACAAGTG CAAGAAACTTTCATTCCAAGTTGTTATTTTTCCTTTTGAAGATGACTCCACCCTTCCCAAATTTGCAGAGCAAAAAGGACTTTCTATCATGCCTTCTTCA TGCCTTGAAGTCCCTGAAACTCCCAAAGCTAATATATTAGTGTCATCCATTAATCACTTCACCATCTACATCAAGGACGGTTCATATCTTACGTCAATAC CAATGAGCTTCATGAGGAATTACCATACACTTGGTGGGAAAAAAGCAAAGTTGAGAGTTGGGAAGAGAACATGGGATGTAAAAGTGCAATATTATCAAAC TAGAAGCTTTGCTAGATTCACTGATGGTTGGCGTGATTTTGCTAAGGAATGTAACTTGAATGTGGGTGATTCTTGTCGATTTCAGATTATAGATCAGGAG AATTTTGAGCTCAGTGTTTCAATTATGAAACATAACCACTAAATTCTAAGTTTCATTTTATATACTCTTTCCTTGTGTTCTTTGTTAATTATTATGAATC CTCTTAACTTTTTTTCCTTCACTTTCATATAGACTATTTCAATTAAATTGTTTCCTTAAAATCCCTTTAAGTTATGTTTTCTAATGGGTCAGAGAAGTTG ATGTTTTTTCATGAACAGTATATATTCAGTAAGAATTAACCGTATGCATTCATTATTTAATGACTGAAGGATAAATTATTT
• Tissue: pods
• Gene name: LI_gene_149314;
• Additional information: details;

Expression of Ll_transcript_373127

FPKM

• PAB: 2
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.2
• PW1: 0.4
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373127

• Blastp: B3 domain-containing protein Os03g0620400 from Oryza sativa with 23.46% of identity
• Blastx: B3 domain-containing transcription factor VRN1 from Arabidopsis with 26.52% of identity
• Eggnog: transcription, DNA-dependent(ENOG41104G8)
• Kegg: Link to kegg annotations (4333466)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423704.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;