Ll_transcript_370723

• Id Trinity: TRINITY_DN47054_c6_g2_i1
• Name Transcript: Ll_transcript_370723
• Sequence: CCCACACACACCACAACTACTCACTCACTCTGCCGCCACCAAACTGTCGGCAACGCTCTAACTTCACAATCACAACGGTGGCGCGCCATCCCATTTTCCT TCTAAGAACAATGCAGCGCCACCGTAGCTCCGCCGTGTTGAACCTGAGCTTGCTCTGTTATTGTTTGGTGCTTAAGCAACTCGTGCTGTTATGTGGCGCT GAGGGACTACCTCAGCACCGTCTCCCAGACCTGCATTGGTATCCTGGAACCGCCACCTGGTACGGCGAACCCGAAGGCGACGGCAGCACCGGTGGGGCAT GTGGTTATGGTACCATGGTGGATGTGAAACCGTTCAGGGCGAGGGTAGGGGCGGTGGGGCCGGTGCTGTTCATGAAAGGGGAAGGGTGCGGTGCGTGTTA TAAGGTGAAGTGTTTGGACAAAAACATATGTACGAGACGAGCAGTGACGGTTATAATCACGGACGAGTGCCCAGGTTGTCCCTCAGACCGAACCCACTTT GATCTCAGTGGTGCTGCATTTGGGCGCATGGCTATTACTGGAGAGAATGGTCAACTCAGAAACCGTGGTCAAATTCCAGTCATTTATAGAAGAACCCCGT GTAAATACCCGGGTAAAAAAATTGCTTTCCATGTTAATGAAGGTTCCACTCCTTTTTGGCTATCACTTCTGGTTGAGTTTGAGGATGCTGAAGGAGATAT TGGCTCCATGCATATACGAGAAGCAGGGTCTAGTGAGTGGGTGCAGATGAATCATTTATGGGGTGCAAATTGGTTCATTATTGGAGGACCTTTAAGAGGG CCATTCTCTGTTAAACTAAGCACTTCCACTGGGAGAACCCTCTCTGCTAGAGATGTTGTTCCAGGCAATTGGGTTCCAAAGGCCACTTACACCTCTCGCC TAAATTTCTACCCTTAAAAAAGCCTTTGCAATTGGTAATTAGTGAGCCATCTTTTACTCTGTTAAAGTTGGTCAAGTCTCATAGCACAAAATTAGTCTTC ATGTAGCCATTTCCCTTTTTTGCTATATATAGTTTTTAACCCTTTTTTTATAGGAAAAGTATTAATTGGAGTGCAAAAGAGCATCCAATGATCCTTCTCT TTTCTTATTTTGTTGATTATGTATACCTACTTTTTATGGTGTGTGATTGTTGGTACTTGGTAGTGAGGGTCATGCAGCCTTCTCCAAAAGAGGAGAGAGA GCGTGTAGTATTGTAGTGTATTAATGTGTGTACTGGGTCTTGGCCCTTTGGGCTTTTAATGAATATGTATACTGGATCCTTCAATTGAATGAATGTCTTT AACTAAAA
• Tissue: pods
• Gene name: LI_gene_149380;
• Additional information: details;

Expression of Ll_transcript_370723

FPKM

• PAB: 0.7
• PNAB: 42
• PS1: 95.8
• PS2: 51.5
• PS3: 102.9
• PW1: 42.1
• PW2: 26
• PW3: 5.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_370723

• Blastp: Expansin-B3 from Arabidopsis with 72.27% of identity
• Blastx: Expansin-B3 from Arabidopsis with 78.07% of identity
• Eggnog: May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity)(ENOG410YA5Q)
• Kegg: Link to kegg annotations (AT4G28250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454372.1)
• Pfam: Lytic transglycolase (PF03330.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;