Ll_transcript_370729

• Id Trinity: TRINITY_DN47054_c6_g2_i3
• Name Transcript: Ll_transcript_370729
• Sequence: AGCACCGGTAACTCTCTTAACGAAACCTCTGCTTTTCACATTTCACTTTCTAATGGTTTGACTCGCTTGAGTTGACTCAATTGGTAACAAATGTATATAT ATTATATTAATGTACAACTTATATACGTTACTTCCTCCGGAGAGAAACAATTATTGAAAAAATATTAAAAAAATGAGAAGACAATACACTTCTTTTCTTT AATTTATGTTGTAATTATAATTTCACTATTAAAAAAAGTAGAGGGGATCAACTTATTCCAATTATTTAGATTTACCACTAATTCAAACCATTGAATTTAT CTATAATTGATGATATAAGATGGGGTTAAGTCTTTTAAACTTAGTCTTGGAGTAACGTGATCCCCATGTCAAAGATATATTAAAAACTATCACTGTACTC ACTCCATTGGTGGTGTAGAGGAGCGTGACTCAACTTATATATAAAGAAAAAAAGATGTCCTCACTATAAGACTTTAATGAAATGAAATAGAATATTCTTC AACTATAGGGTAAGTGACAATTGGTGGGGAAAAAGGTTAAGCTCTGTTATTTTGCCATCTATTACTATTTATAATTTTTAGTTTCTTAATTTGCAATCTG AAATTCTACTTGGACTACAATGTTATGGTTTTAGAGTCTCTACAATGAAATAATGCCACTGCAAACTATCACATCTTAGCACAATTTTACTTACTATTGT AATAAGCATAACCACAATGGAAAGTGAACATTTTAGACTTTTAGTATTAAATAATGGATTAGTGAAGTTATGGTAATAAGTGTTGAATCGGTGGTGGTAA TAAATGATGAATGTGAGTATTCACAGGTGGGGCATGTGGTTATGGTACCATGGTGGATGTGAAACCGTTCAGGGCGAGGGTAGGGGCGGTGGGGCCGGTG CTGTTCATGAAAGGGGAAGGGTGCGGTGCGTGTTATAAGGTGAAGTGTTTGGACAAAAACATATGTACGAGACGAGCAGTGACGGTTATAATCACGGACG AGTGCCCAGGTTGTCCCTCAGACCGAACCCACTTTGATCTCAGTGGTGCTGCATTTGGGCGCATGGCTATTACTGGAGAGAATGGTCAACTCAGAAACCG TGGTCAAATTCCAGTCATTTATAGAAGAACCCCGTGTAAATACCCGGGTAAAAAAATTGCTTTCCATGTTAATGAAGGTTCCACTCCTTTTTGGCTATCA CTTCTGGTTGAGTTTGAGGATGCTGAAGGAGATATTGGCTCCATGCATATACGAGAAGCAGGGTCTAGTGAGTGGGTGCAGATGAATCATTTATGGGGTG CAAATTGGTTCATTATTGGAGGACCTTTAAGAGGGCCATTCTCTGTTAAACTAAGCACTTCCACTGGGAGAACCCTCTCTGCTAGAGATGTTGTTCCAGG CAATTGGGTTCCAAAGGCCACTTACACCTCTCGCCTAAATTTCTACCCTTAAAAAAGCCTTTGCAATTGGTAATTAGTGAGCCATCTTTTACTCTGTTAA AGTTGGTCAAGTCTCATAGCACAAAATTAGTCTTCATGTAGCCATTTCCCTTTTTTGCTATATATAGTTTTTAACCCTTTTTTTATAGGAAAAGTATTAA TTGGAGTGCAAAAGAGCATCCAATGATCCTTCTCTTTTCTTATTTTGTTGATTATGTATACCTACTTTTTATGGTGTGTGATTGTTGGTACTTGGTAGTG AGGGTCATGCAGCCTTCTCCAAAAGAGGAGAGAGAGCGTGTAGTATTGTAGTGTATTAATGTGTGTACTGGGTCTTGGCCCTTTGGGCTTTTAATGAATA TGTATACTGGATCCTTCAATTGAATGAATGTCTTTAACTAAAA
• Tissue: pods
• Gene name: LI_gene_149380;
• Additional information: details;

Expression of Ll_transcript_370729

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.9
• PS2: 0.3
• PS3: 0.7
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_370729

• Blastp: Expansin-B3 from Arabidopsis with 78.11% of identity
• Blastx: Expansin-B3 from Arabidopsis with 78.95% of identity
• Eggnog: May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity)(ENOG410YA5Q)
• Kegg: Link to kegg annotations (AT4G28250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454372.1)
• Pfam: Lytic transglycolase (PF03330.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;