Ll_transcript_371769

• Id Trinity: TRINITY_DN47062_c0_g1_i1
• Name Transcript: Ll_transcript_371769
• Sequence: CCTCAAACAGAGTTAACCGCAACCATAGTAGTTAGCGCCTTACTCAATAGCTGCACCCACAAAAGCATTGGACCCTTTTCATTCCAAAACCCATAACACA CTACAAACGTAACACACAGTGTAAATGTAAAGCTAGCATCTTTCAATAGCAGACTCCACAATAGCGCTACAAGCACCCCAAAACTTTCGTTCATTTCATT GCCGAAGATGATGATTATGGAAAATTTGTGTGTGAGATAGAAGATTGAAAACCAAAGTTATTTGTGGATTCAGACTAGTGATTTTTGAAATGGATAAAAT AGCTGATTCTAGTGGTGAGAACAAGGAGGATAATAAGGAAAAATCAATTCATCATTTTATAGTTCCTGATGATTCTTCTCTATGTCTGATTGATTTCCCT CCATATGAACTACCACCGTATGAGATTTCACAGAGTTCAAATGAATTTGAGTCATTAGTTGTGGGATCAGATCATCAAAGAGAAGAACCGGAAGTGCATA CGTATAAGCTTGTGGATTGGAATGATTCGTTTGCAATCAAGGTTGAGGAGTTATTGTTGTCTAATTTGCAAGCAATTTTCAAGGATGCAATCAAGCAGAT TGTTGAGTTGGGTTATAGTGAAGATGTAGCTGAGAAAGCCCTTTCAAGGAAGGCCCTATACATACAGGAAGGAGACCCTGTTTCGAATATTGTTGATGAT ACATTGAATGTTTTGAAGGGAAAACATGTTGCCACCCCAGATGTTTTGATGGGAAAAGATATTGCTACTTTAGACATCGTCTTTGAAAATTTTCAGCACT TGGTGTATTACACCATGTTGGAGATGATCATTGTGCTTCGTGAAGTCAGACCATCCCTAACAATCGGTGAAGCGATGTGGGTATTGTTGATGTGTGACTT GAATGTTTCACTGGCATGTACAGTGGAAGATTGTCTGAATGTTGTTTTCGATGAGGAAAGTTGTATCAGTCCTTCCTCTACTCAATTAAAGTCAGAGGTT CAAAGGTCTGACGTAATTTCAAATTATAGTTCACCAACTTCCCAGGGCTCATCCCCCACTTACAAGAAATGTAAATCTGAAGCATCCCCGTTTGGGAAGC TCCAAAATTCAACCAATGATAAAAGCTATTTTCCTTCAGAAGTGGTAAAGTCTCAGGAAGAGAATATTTCACTGCCAACTGTTACTGGTAAACCCCCAGG AACTTCAGGGGGTGAATGTAAAGCAGGACATTGTTCTAAGCGACACAATAGAAAAGAAATTGCAGCACTTAGGCAGAAGTTTCTCCATATGGAGAAAGTG TATAGGGCCCGTGGAAAAGGGGGTTTGAAGACTGGTAAGTTTTCAAGTGTTGGTGGTTTGATGATTGAAAAAAGAATCAAACCACCATATGATATTCATA ATCAGCAAATGAAAAGTGACTTTTCAAACACAACAAGCAAACAAGGAGATTGTGCATCAGATGCAATGTGCCATGTCTCATCCAGTAGTGCATCTACTTT ACCTGCAGGAAGCAGTTCAAAAACATTATCAGACACAATATCCTCTCAAATAGTGAATCCCGATATTTCAGCATCAGAAACAATGTCCACACCAAAATCT GAGCCTACCTCCTTTGATGCTCAGAATATTCTTGACGAGTGTGTTGGTATTCCGTATGATGAGTCTTTGGGTATGTATGTCCCACGAGACCAGAAGGATG AAATAATTTTGAAGTTAGTTCCTCGAGTGCATTTATTGCAGGGTGAGCTACAAAGCTGGAGCAGCTGGACAAATCAAAAGGTTATGCAAGTTACTGGTAG GCTTGGTATGCTGCAGCCTGAGCTTAAAATGCTGAAGAATGAGAAGCAAGAAGCCGAAAATGATGCAAAACTTTTTCAGGAGAATGTTGTGAAGAGGATA TCTGAGATGGAGAATACCATAGAGAATACTAAAAAGCAAATTGAGAATACTACTTCTATTGTTCTCATGCGTGATGCAGAAAACACATTGCTAAAGAACG AGTTGGATGCTGCTAAGTTGTCATTTGAAAAGTCAATGATGAGCCACCAACAAGCACTGGAGAGAGAACAAATTGCTCTTAGAAAATCAGAATCATTGAA TAGCGAGAATGCTTTGCATCGAGATGAGCTTGAGAGAGAGAAACATAAGTTATCTAACTTACGACAACAACTTAACAAGGAGAAAACTCTTGTAGCCAGG TTTGAGGATAAAGTAGAAAAAGAGAGAGCGGAAATAGAAAAGGTCCTTAAACAGACTGCATCTATCATAGAGGAAAGGAAACAACTAGCAGAACAAACAA AAGCTGAGGAAGATAAGATCAGGGAAAAGGTAGCCGATAACTTACAAAAATATACGGAGGTGATTGCAAATCTTGAAACACAATTGGAAGAAAGAAAACA AAAATTAGAGTCTGAAAAAATTGTAGCACTTCGTAAAGGTAAGCTGACGGGGAGAAAGAAATGGGATTCGTCGCAGACCATGGTTAGCTGCCAAGCCAAA TCTGCAACTGAAAGTTTGAGGCGGGAGCATGAGTGTGTCATGTGCCTATCTGAGGAGATGTCGGTAGTTTTTCTTCCATGCGCACATCAGGTTCTGTGTG CAGAATGCAACAAGCTCCATAAGAAACAAGGAATGAAGGATTGTCCTTCGTGTAGGGCTCCGATTCAACAGAGGATTCATGTTAGATTTGCTGGGCAGTA GAGAGTATTAATCATCCTGCATGGATGTGTATCTTAGAGAGATTTTACAATAAAAGTAAGGATTCCTGAGAAGGTTCTTTTGAAGACCATGTAGGCCATT ATGGCATTGTGTCTCACCTTCCTTTTTTGATTATATATTTTGGTTTTGAATCTGAAACAGATCCTAGATGATGTCTCAAAAATAACAGCAAAGAAATATA AAGCTGCAAAGCAATTATTTTATATAATAGAGTAACCTAAATGAG
• Tissue: pods
• Gene name: LI_gene_149478;
• Additional information: details;

Expression of Ll_transcript_371769

FPKM

• PAB: 0.1
• PNAB: 2.2
• PS1: 6
• PS2: 2.3
• PS3: 5.2
• PW1: 0.8
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371769

• Blastp: Putative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
• Blastx: Putative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
• Eggnog: e3 ubiquitin-protein ligase(ENOG410Y2TA)
• Kegg: Link to kegg annotations (AT4G03000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441814.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;