Ll_transcript_371773

Id TrinityTRINITY_DN47062_c0_g1_i3
Name TranscriptLl_transcript_371773
SequenceCCTCAAACAGAGTTAACCGCAACCATAGTAGTTAGCGCCTTACTCAATAGCTGCACCCACAAAAGCATTGGACCCTTTTCATTCCAAAACCCATAACACA CTACAAACGTAACACACAGTGTAAATGTAAAGCTAGCATCTTTCAATAGCAGACTCCACAATAGCGCTACAAGCACCCCAAAACTTTCGTTCATTTCATT GCCGAAGATGATGATTATGGAAAATTTGTGTGTGAGTTTTCAATTAAGTAAGCCCTCATTTTGCTATAAGTTCTTGCTAAAGATAGAAGATTGAAAACCA AAGTTATTTGTGGATTCAGACTAGTGATTTTTGAAATGGATAAAATAGCTGATTCTAGTGGTGAGAACAAGGAGGATAATAAGGAAAAATCAATTCATCA TTTTATAGTTCCTGATGATTCTTCTCTATGTCTGATTGATTTCCCTCCATATGAACTACCACCGTATGAGATTTCACAGAGTTCAAATGAATTTGAGTCA TTAGTTGTGGGATCAGATCATCAAAGAGAAGAACCGGAAGTGCATACGTATAAGCTTGTGGATTGGAATGATTCGTTTGCAATCAAGGTTGAGGAGTTAT TGTTGTCTAATTTGCAAGCAATTTTCAAGGATGCAATCAAGCAGATTGTTGAGTTGGGTTATAGTGAAGATGTAGCTGAGAAAGCCCTTTCAAGGAAGGC CCTATACATACAGGAAGGAGACCCTGTTTCGAATATTGTTGATGATACATTGAATGTTTTGAAGGGAAAACATGTTGCCACCCCAGATGTTTTGATGGGA AAAGATATTGCTACTTTAGACATCGTCTTTGAAAATTTTCAGCACTTGGTGTATTACACCATGTTGGAGATGATCATTGTGCTTCGTGAAGTCAGACCAT CCCTAACAATCGGTGAAGCGATGTGGGTATTGTTGATGTGTGACTTGAATGTTTCACTGGCATGTACAGTGGAAGATTGTCTGAATGTTGTTTTCGATGA GGAAAGTTGTATCAGTCCTTCCTCTACTCAATTAAAGTCAGAGGTTCAAAGGTCTGACGTAATTTCAAATTATAGTTCACCAACTTCCCAGGGCTCATCC CCCACTTACAAGAAATGTAAATCTGAAGCATCCCCGTTTGGGAAGCTCCAAAATTCAACCAATGATAAAAGCTATTTTCCTTCAGAAGTGGTAAAGTCTC AGGAAGAGAATATTTCACTGCCAACTGTTACTGGTAAACCCCCAGGAACTTCAGGGGGTGAATGTAAAGCAGGACATTGTTCTAAGCGACACAATAGAAA AGAAATTGCAGCACTTAGGCAGAAGTTTCTCCATATGGAGAAAGTGTATAGGGCCCGTGGAAAAGGGGGTTTGAAGACTGGTAAGTTTTCAAGTGTTGGT GGTTTGATGATTGAAAAAAGAATCAAACCACCATATGATATTCATAATCAGCAAATGAAAAGTGACTTTTCAAACACAACAAGCAAACAAGGAGATTGTG CATCAGATGCAATGTGCCATGTCTCATCCAGTAGTGCATCTACTTTACCTGCAGGAAGCAGTTCAAAAACATTATCAGACACAATATCCTCTCAAATAGT GAATCCCGATATTTCAGCATCAGAAACAATGTCCACACCAAAATCTGAGCCTACCTCCTTTGATGCTCAGAATATTCTTGACGAGTGTGTTGGTATTCCG TATGATGAGTCTTTGGGTATGTATGTCCCACGAGACCAGAAGGATGAAATAATTTTGAAGTTAGTTCCTCGAGTGCATTTATTGCAGGGTGAGCTACAAA GCTGGAGCAGCTGGACAAATCAAAAGGTTATGCAAGTTACTGGTAGGCTTGGTATGCTGCAGCCTGAGCTTAAAATGCTGAAGAATGAGAAGCAAGAAGC CGAAAATGATGCAAAACTTTTTCAGGAGAATGTTGTGAAGAGGATATCTGAGATGGAGAATACCATAGAGAATACTAAAAAGCAAATTGAGAATACTACT TCTATTGTTCTCATGCGTGATGCAGAAAACACATTGCTAAAGAACGAGTTGGATGCTGCTAAGTTGTCATTTGAAAAGTCAATGATGAGCCACCAACAAG CACTGGAGAGAGAACAAATTGCTCTTAGAAAATCAGAATCATTGAATAGCGAGAATGCTTTGCATCGAGATGAGCTTGAGAGAGAGAAACATAAGTTATC TAACTTACGACAACAACTTAACAAGGAGAAAACTCTTGTAGCCAGGTTTGAGGATAAAGTAGAAAAAGAGAGAGCGGAAATAGAAAAGGTCCTTAAACAG ACTGCATCTATCATAGAGGAAAGGAAACAACTAGCAGAACAAACAAAAGCTGAGGAAGATAAGATCAGGGAAAAGGTAGCCGATAACTTACAAAAATATA CGGAGGTGATTGCAAATCTTGAAACACAATTGGAAGAAAGAAAACAAAAATTAGAGTCTGAAAAAATTGTAGCACTTCGTAAAGGTAAGCTGACGGGGAG AAAGAAATGGGATTCGTCGCAGACCATGGTTAGCTGCCAAGCCAAATCTGCAACTGAAAGTTTGAGGCGGGAGCATGAGTGTGTCATGTGCCTATCTGAG GAGATGTCGGTAGTTTTTCTTCCATGCGCACATCAGGTTCTGTGTGCAGAATGCAACAAGCTCCATAAGAAACAAGGAATGAAGGATTGTCCTTCGTGTA GGGCTCCGATTCAACAGAGGATTCATGTTAGATTTGCTGGGCAGTAGAGAGTATTAATCATCCTGCATGGATGTGTATCTTAGAGAGATTTTACAATAAA AGTAAGGATTCCTGAGAAGGTTCTTTTGAAGACCATGTAGGCCATTATGGCATTGTGTCTCACCTTCCTTTTTTGATTATATATTTTGGTTTTGAATCTG AAACAGATCCTAGATGATGTCTCAAAAATAACAGCAAAGAAATATAAAGCTGCAAAGCAATTATTTTATATAATAGAGTAACCTAAATGAG BLAST
Tissuepods
Gene nameLI_gene_149478; 
Additional informationdetails; 

Expression of Ll_transcript_371773

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_371773
BlastpPutative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
BlastxPutative E3 ubiquitin-protein ligase RF298 from Arabidopsis with 38.21% of identity
Eggnoge3 ubiquitin-protein ligase(ENOG410Y2TA)
KeggLink to kegg annotations (AT4G03000)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441814.1)
PfamZinc finger, C3HC4 type (RING finger) (PF13920.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;