| Id Trinity | TRINITY_DN47064_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_371451 |
| Sequence | TATTTATTTATTTTTCATTTTTTCTTCCCCATTATTTATTTACTCCACCTTTTCCTGCAAAACCCAAAATTCATATATCACTTTGGAGAGTTCATCAACG AGAGTTTGTAATTTTCTCTATAATTGTATATTTTTTCCTCATATTTTCGTATTAATTTTGAAGCTTTTTGTTTTCTCTGCAATGGTGGAGATTTGAGGAT ATAGAACTTCGATTTTTTCGGAAACCAAGTTCAACTGTTCCAAAGTTTCTATTTTTGAAGTTTCGTGTAGATAGTAAATTTTCCCTGCATTCAAATCTAT TTCTGTTCAGTAAAGTTAATATTTTTCTTTAAAAAAAATCATCTGTTCCCTGATTTTTTGTGTGATTCAGTGTGAAAACGTGCGAATCTTCAATGGGTAG GGTTTAATAAAAGTTTTGAAGGTTTTGGGGTGTCTTAGTTTTTCATTTATTGCATAAAATGGAGGGAAAGGAGAATTTTGTTGGTGTTGGCCATCATCAT GCAGTGTTAGGTGGGGAAGCTCCAGATAGCTTCCAATTGGCTCCTAGAATTGAGAACAACTTGGATTTTTCCAGAGCCACAGTGCCGGTTCCGTCGCCGG TAACTGAGGGGAAGAAGAAGAGAGGGAGGCCTAGGAAGTATGGACCAGATGGCAAGGCTGCAGCCTTGGCTTTGTCTCCCATGCCGATTTCGTCATCGAT CCCGTTGACTGGAGATTTCTCAGCTTGGAAAAGGGGGAGAGGGAGGCCTGTTGAATCTATAAAGAAGTCAACATATAAGTATGAAGTTGAAGGTCCAAGA TCAGGTGTTTTTATAATTCTTTGATCTGTTGAATTTGAACTTTGAATTGTGGCATTTTTAATCTTATTTATTGCTAATGATTTTTTGTTTTGTTTCTTTA GTTTTAATCTTACATCTGGTGTTGTGATTTTGTATTTATTGTTATATTTGAAGTCTTTGAGGATTAAGAGTAGGAAAGTGATAAATATAGTGAGTTTTTC TAGCCTAGTTGGTTTGTCATATTACCTCTTTAGTGGAGAAATATCATAACTAATTTTTCCCTTTGGGTTTTAATCCAACTTATTTGAAGTTAATCATTTA GAGGGTTAGTTATTTCCTTTGATCTATGTATATAGCATGCAGGTATTTTCTCGGATTTGATTTATTCTAGTGTATTAGAGTTTGTGAGGTTGTGGGGGTA TGGGTGGACCCTTAGCTTAGATTCCTTTTCAGATATGGAATAAAAGTTGTGGGGTGGATGGGGATATTTTTGGTTGGATTTTGTTTCAGGTAGCATATAA ACTCTCTATTTTCCGTTATGAAGGAAGAGGATGGTGTAATATGACGAAGAAAATGTTTAGAGAAAATGAAGGAGCCATCGGCATGTTCAATAGGTTGAGT CTAGTAGTCCAGTAGATAGTTAGATGATGTGGCCATGCTTGAACTGATATAAAATAGTTATTTTTGACAGCTCACTGGCTTCCTTGTTTGATATTGGCTT GGACCATGTCATCTTGCAAAATGAAGAACAAGTATTGAATGGTCTGGTTAGGATTATTCATGAATCGGCATGATCGGAAAATTGGGTTTCATTTTTACGA ACTAGTGCCAAACTTAGATTTTCAATTAATTTAACTTATCCATGCAGAATGCTAAGGGTGGCTTCTTAGAGTGACACTTTTCATTTATATCTAATTCAAA TGAAGTGAATAGAGGATGAGAGAAGGTTTTTGTGAACCTTTGTGTCAAGACTTTTATAAAAAGCGAGCAAGAAAATTAGTGGTTCCAATGAGACCATTTA AGTACCCCCATTATTCCTTTATTTTAATATTTTAGAGTTCCTTAATTTTAGAAGATTTAAACATTAAATCAAAGGGAAGGAAAAGCTTTACTTAATCACT CATACCCCGCACGTGAAGGATATATTTCCACAGGGTTATAGACCATCTTGTGTAGATCGTCATGATCTCTACAATATTATGTCATAGCAGAGGTTAACAT CGTAAATAACATATTGAAGAGCATATGCTTTATTAACTTGATTAGTCAAATGGAGTAAATGTTTTGTCAACGAACATGATTTATTATAGAGAATTATGAC ATCGTTCTATCCATGTAGTCGATCCCACCGGGTGGGATTAAGGCTTAGTTGTTGTTGCTGTAGTCAAATAGAATAAATCTAGGCTAATGATGGTTCTGAA ATTAGGGTTATAATAGGTATTTTTATGGACTAGTATTAATACATTCTTCTATTCCTTAACTCTCTGGCTGTCAATTCATCAACCCATCTATGTATATTTT AGGTGAGGGGATTGCATACTCAGTTGGTGCCAATTTCACAGCACATGTGCTTACAGTAAATGCCGGCGAGGTATTCTGTTAATTTCCTTTTAGGTCTATA TTCTGAGGTGAAGTTCGATTGTGGTTTTACTCTAATCATTTTGTGTATGAATGCCATATACAAAACAAATAAAAAGGCAATTTCATTTTGCTCAAACTTT AAATGCTTTACATTTCATGAAAACAATTCTTCTATTGAAACAAAAATCCTCTAAAATGTATTTAACTTTTGGAGCATGTGATTTTCCCTTCTGCATTTTG GAGCATGTGATTTTCCCTTCTGCATTTTGGAGCTCCAACCATGTTTTTCTATTTTAAGTATGTTCATTGGTTACAAAAAGTCTTTTATGTGGGTTACTCT ATACTACTACTCCTAACAATTAGATTATTTATCTAATTCTAGAGACGACAGTTACACCTTGGTTGAATTGTTTAAAGAAAACAATGTCCACAACCCAAAG GTTAGGGGCATTGAATTCTAGGTTTGGTGGTTCCAGGAAAGATGTAGAAAAAACAAGTGATATAAGATAGTTTTTCTTGTTTATAATGAAATGTGATGTA CAATGATGTTATAATTTATCCATAATTTTTTAATGAAATATTAACAACTTGGTTTTTTTGTACTTAAAAAAGAAATGTTGTTACATAGAGTATATAATAC TGACTTGTAATATCACAACTTTCTTAGTTTTACATCGATCATATCCCGTGGTTGTGTAAAGTATCATTGTTATAGAAGTTAACTATCAAACTGCCTTTTA TTTTAAAAAATAGTATTATTGATGTGAAGTGTTCTTAATTGTATTTGTGATTTTCCTGTGGCCATCTCAGGATGTTACTATGAAGATTATGTCCTTTTCT CAACAAGGATCACATGCTATATGCATTCTCTCTGCAAATGGCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149508; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371451
| Blastp | AT-hook motif nuclear-localized protein 3 from Arabidopsis with 61.4% of identity |
|---|---|
| Blastx | - |
| Eggnog | Domain of unknown function (DUF296)(ENOG41114DS) |
| Kegg | Link to kegg annotations (AT4G25320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427844.1) |
| Pfam | AT hook motif (PF02178.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |