Ll_transcript_371325

• Id Trinity: TRINITY_DN47069_c2_g1_i1
• Name Transcript: Ll_transcript_371325
• Sequence: GGAGAATTTACCGATGCATTTTATCATGAAAACTCATTTTCTTGTGTATTATTATTCACATGTTAGAAACTCTAACATTATTGAGAGAGTAATAATTGTA GGAAGATTATTTATTAGGAGAAACATTTGAACAGTTTCCTATGTTGGTTGACTTAGTATAAGATTACTACTGAATGAGTAAATAAATAAGATGAATATTG ATATCCATAAAGAAGATAGATCACAAGTTTGAAGAAAAAGAAAGAAGAAAAAAGAGGCATGGGGGTGGAATATTATGAGTTATTGGATGTTGAAAGAAGT GGTAGTGATGAAGATTTGAAGAAAGCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAGAATCCCAATAACAAAAAGGAAGCTGAAGCTAAGTTTA AGCAAATTTCTGAAGCCTACGAGGTGCTTGGTGATCCTCAGAAGAGAGCTATCTATGATCAATGTGGGGAAGAAGGTCTGAAAGGTCAGGTACCCCCTCC TGATGCTGGAGGTGGTGGATCAACTTACTTCTCAACCGGAGATATCCCGGGATCCTTTCAATTCAATCCAGGGAATGCTGATGACATATTTGCTGAGTTT TTTGGGTTTTCAAGCCCGTTTGGTGGGAGAGGTGGTGGCAGTGACGGCATGAGGTCAAGGTTCTCTGGTGGAATGTTTGGTGATGATATGTTTGGACCTT TCGGGGAAGGAGGAGGGATACATATGAGTCAAGGTGCACCTCAAAAAGCTCCTTCTGTTGAGAACAAGTTGACCTGCACTCTGGAGGAGATATATAGAGG AACTACCAAGAAGATGAAGATCCATAGAGAAATTGCTGATGCCACTGGAAAAACCATGCATGTGGAGGAGATCTTGACCATTAATGTCAAGCCTGGTTGG AAGAAGGGGACAAAGATCACCTTCCCAGAGAAAGGACATGAACAACCAAATGTCATGCCTGCAGATCTTGTTTTCATCATCGATGAGAAGCCGCACAATG TCTTCACTCGAGATGGAAATGATCTCATTGTCAACCAGAAGATTTCTCTTGTAGATGCCTTAACAGGTTATACAGTGCACCTCACTACACTGGATGGTAG AAACTTGACCATATCAATCAACAACGTTATCCATTCTAACTATGAGGAGGTTGTCCAAAGAGAAGGAATGCCGCTTCCAAAGGATCCTTCAAAGAAGGGA AATTTGAGAATAAAGTTCAGTATCAAGTTTCCAACTTGGCTCACCGATGAACAAAAGGAAGGCATAAAGAAACTCTGGGCTGCTTCAGCCTGAGATTAAA TATATAGATGGATGATAATATTATTTGGCTTATATAGACGTAGCTATCTTATGACTATATATTAGCTTTGCCAATAAATTCCGTTGCTTCTATTTATATG TTTTAACTTATACAGTGAAAAAATTTAGATTAGTTTTGGTTTGGTTTTTCAGCGAATGAGCTAAGTTTTTCAAATCCTTATTTTGGCAGTGATAAACTAT GATGAGGATTGCAAGCTGAGTGAGTAATCACCATTATCTTATCATTTATTTTCTTAGCCAGTGAAGCACTGACAATCAAAA
• Tissue: pods
• Gene name: LI_gene_149525;
• Additional information: details;

Expression of Ll_transcript_371325

FPKM

• PAB: 8.8
• PNAB: 11.1
• PS1: 14.6
• PS2: 9.3
• PS3: 16.1
• PW1: 9.5
• PW2: 10.1
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371325

• Blastp: DnaJ homolog subfamily B member 4 from Homo with 44.6% of identity
• Blastx: DnaJ homolog subfamily B member 13 from Mus with 41.3% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (11080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414166.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;