Ll_transcript_371329

• Id Trinity: TRINITY_DN47069_c2_g2_i2
• Name Transcript: Ll_transcript_371329
• Sequence: TAAACGGCAAGACGAGTAGAACATGTAACCAGAAACATCTTAACCCACCATGGTTTTGTCCGGAATGTTCCACACCCTTCTGATCTTTTTTGGTGCATTG CCACCTTCTACACAATTCCACCTCTTTCAAATATCAACTCTTTCTAACCATTCATCAACCATTCACCAAAAATATATCACAAGCTTCAACAAAAGCGTTA CATACACAAAATCTATTATCTCTTGCAGAAAATCTAGTACCACTTACAGAAAGTCCATTCCAAAACCCAAAGTTTGAAACTTTAGAAGAAAAAGAAACAT GGGTGTTGACTACTATAAGATTTTACAAGTTGACAAGAATGCAAATGATGAAGACTTGAAGAAATCTTACAGAAAGCTTGCCATGAAATGGCACCCTGAT AAGAACCCAAACAATAAGAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTAAGTGACCCTCAGAAGAGAGCAATTTATGATC AGTATGGAGAAGATGGACTTAAAGGCCAAGTGCCACCTCCGGATGCAGGTGGAGCTTCATTCTTCCAAAGTGGAGATGGTCCTACCACCTTTAGGTTCAA TCCAAGAAATGCAGATGACATTTTTGCTGAGTTTTTCGGATTTTCAAGCCCGTTTGGTGGAATGGGGGGCGGTGGCGGCAGCGGAGGCATGAGGGGTGGG ACAAGGACCTTTGGTGGAGTATTTGGTGATGATATATTTAGTTCATTTGGGGATGGCAGTGGCAGGCCAATGAGTCATGGTCCACGAAAGGCGTCTCCTA TTGAAAATGTCATGCCTTGTAGCCTTGAGGATCTCTATAAAGGGACCACCAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCTAGTGGGAAAACTTT GCCGGTGGAAGAAATCTTAACCCTTGAAATCAAACCTGGCTGGAAAAAGGGAACGAAAATCACCTTCCCAGAGAAAGGGAATGAGCAACCAAATATTATT CCTGCAGATCTCGTGTTTATTATCGACGAGAAACCCCACGGTATATTTACAAGGGATGGCAATGATCTTGTTGTCACACAAAAGGTATCACTTGTAGAAG CTCTTACAGGCTACAGTGTCCATCTTACAACTCTTGATGGCAGGAATCTGACTATTCCTATAAACAATGTAATTCATCCAAACTATGAAGAGGTTGTCCC AAGGGAAGGTATGCCAATTCCAAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAGTTCAACATCAAATTCCCAACTAGGTTAACATCAGAGCAGAAA GCCGGAATTAAGAAGCTTATTGCACCATGATAGATAGATCCTGCGTATAGTGTTTATCATTTTGCTCCCCTTTGTGCCATTTTTCCTCCAAGGATTGACA TGTATGTAATCCAGGCAATGCTGATTGAGGTTTGAGGATTAACAACTATATATGATTAATAAAGAGTACTTCTTTTGTTATGTTGTCATAAGTGCTATTT TTTCAAGATAATTGTTGGTATGTTTATTGATTGATACTGT
• Tissue: pods
• Gene name: LI_gene_149526;
• Additional information: details;

Expression of Ll_transcript_371329

FPKM

• PAB: 1.3
• PNAB: 0.9
• PS1: 0.5
• PS2: 15.2
• PS3: 1.3
• PW1: 0.5
• PW2: 0.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371329

• Blastp: DnaJ homolog subfamily B member 4 from Pongo with 45.56% of identity
• Blastx: DnaJ homolog subfamily B member 4 from Pongo with 43.91% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (100174554)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422500.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;