Ll_transcript_371341

• Id Trinity: TRINITY_DN47069_c2_g2_i5
• Name Transcript: Ll_transcript_371341
• Sequence: AATCACCAATCTGCATAGAATATTTAAGTTTAGATATAATCTCGTTCATGCTAATTATTTGTCACATGAGAGATTCGATAGCTTATTTTTCGGTGAAGAG AACAGAAGCAAGAGAAGAAGTAAAAGAAAAACCGCAAAACTGAAGAAGAGAAAGAGAGAAGAGCAACCAGCACCATCATCAAAGATGGGTGTTGACTATT ACAAATTGTTGCAGGTAGATAAGAATGTGAAAGATGAAGAATTGAAGAAAGCTTATAGGAAACTCGCCATGAAATGGCACCCTGATAAGAACCCAAACAA TAAGAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTAAGTGACCCTCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGAT GGACTTAAAGGCCAAGTGCCACCTCCGGATGCAGGTGGAGCTTCATTCTTCCAAAGTGGAGATGGTCCTACCACCTTTAGGTTCAATCCAAGAAATGCAG ATGACATTTTTGCTGAGTTTTTCGGATTTTCAAGCCCGTTTGGTGGAATGGGGGGCGGTGGCGGCAGCGGAGGCATGAGGGGTGGGACAAGGACCTTTGG TGGAGTATTTGGTGATGATATATTTAGTTCATTTGGGGATGGCAGTGGCAGGCCAATGAGTCATGGTCCACGAAAGGCGTCTCCTATTGAAAATGTCATG CCTTGTAGCCTTGAGGATCTCTATAAAGGGACCACCAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCTAGTGGGAAAACTTTGCCGGTGGAAGAAA TCTTAACCCTTGAAATCAAACCTGGCTGGAAAAAGGGAACGAAAATCACCTTCCCAGAGAAAGGGAATGAGCAACCAAATATTATTCCTGCAGATCTCGT GTTTATTATCGACGAGAAACCCCACGGTATATTTACAAGGGATGGCAATGATCTTGTTGTCACACAAAAGGTATCACTTGTAGAAGCTCTTACAGGCTAC AGTGTCCATCTTACAACTCTTGATGGCAGGAATCTGACTATTCCTATAAACAATGTAATTCATCCAAACTATGAAGAGGTTGTCCCAAGGGAAGGTATGC CAATTCCAAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAGTTCAACATCAAATTCCCAACTAGGTTAACATCAGAGCAGAAAGCCGGAATTAAGAA GCTTATTGCACCATGATAGATAGATCCTGCGTATAGTGTTTATCATTTTGCTCCCCTTTGTGCCATTTTTCCTCCAAGGATTGACATGTATGTAATCCAG GCAATGCTGATTGAGGTTTGAGGATTAACAACTATATATGATTAATAAAGAGTACTTCTTTTGTTATGTTGTCATAAGTGCTATTTTTTCAAGATAATTG TTGGTATGTTTATTGATTGATACTGT
• Tissue: pods
• Gene name: LI_gene_149526;
• Additional information: details;

Expression of Ll_transcript_371341

FPKM

• PAB: 1.2
• PNAB: 1.5
• PS1: 3.1
• PS2: 0.7
• PS3: 0.8
• PW1: 1.2
• PW2: 1.8
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371341

• Blastp: DnaJ homolog subfamily B member 13 from Mus with 44.15% of identity
• Blastx: DnaJ homolog subfamily B member 13 from Mus with 43.86% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (69387)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422500.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;