| Id Trinity | TRINITY_DN47069_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_371338 |
| Sequence | GGAGAATTTACCGATGCATTTTATCATGAAAACTCATTTTCTTGTGTATTATTATTCACATGTTAGAAACTCTAACATTATTGAGAGAGTAATAATTGTA GGAAGATTATTTATTAGGAGAAACATTTGAACAGTTTCCTATGTTGGTTGACTTAGTATAAGATTACTACTGAATGAGTAAATAAATAAGATGAATATTG ATATCCATAAAGAAGATAGATCACAAGTTTGAAGAAAAAGAAAGAAGAAAAAAGAGGCATGGGGGTGGAATATTATGAGTTATTGGATGTTGAAAGAAGT GGTAGTGATGAAGATTTGAAGAAAGCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAGAATCCAAACAATAAAAGAGAAGCTGAGACTAAATTCA AGCAAATTTCTGAAGCCTATGAGGTTCTAAGTGATCCACAGAAGAGAGCAGTTTATGATCAGTATGGAGAAAATGGCCTTAAAGGTGGAATGTCACATCC GGACACTGCCGGTGCTTCATTCTTCCATGCTGGGAATGGTCCAACAACATTTAGGTTCAACCCGAGAAATGCTGACCATGTATTTGCAGAATTTTTTGGG TCTTCAAGTCCATTTGGAGGAGCCGGTGTTGGTCGTGGCGGTTGTGGTGGTGGTTGTGGTGGCTATGGCAGGGGCATGAGATTTGGGAATAGTTGGGTGT CAAGGTCCTTTGGTGGAATGTTTAGAGAAGACGTGTTTGGTTCATCCGGAGAAGGCAGACCTATGAATCAAGGTGCACCACGCAAAGCACCTCCTATCGA AAATACATTGCCTTGCAGCCTTGAGGAACTTTACAAGGGGACTACCAAAAAGTTGAAGATCACAAGGGATGTTGTAGATGCAAGGGGGTGAGGACTATTT GCTAGAAATTTCAATTTACTACAATTTCACTTTGAGCTTCTTGCAACTGAATTTCATCAACATAATGAGTTCTATTGTTGGATTTGTTTAAAACTGAAGT TTCAATACATTTCTGTTTTACTGATCTAGTTCAAGCTATTGTGAGTGTTGATAGTATAGTTTGGCTAGTTAGAACTTAGAAGATTGCTTGAGTTGCTTTG ATGACTTAGCCTTTAGCTATTACTTGGTCATTTCTGTGTTTATATATGCCATGTATTGGATTATTGTCCAAGACTTTCTCATTCTAATCCTTGCTCTGGC CATAATGCTCAAAATCTACTTTAGATAGTAATTAGTTTTCTTCATTTGTTGGATTTCCCCTTCCTTTATAATTGTTTTGTGGATAATCAGTGGACTTTAA TATGCTACAGATTTTAGCAGTCTGCACTTTTTTATGTGAGGTATCGTACTATACCAAAGATCAAAAGTTCGATTTCTGTGAGGGATACACACCTCAATAG AGATTACTTCCTGACCTATAGGGTGAGGAGATACCCTTGGTTATAAACTTATACCAAAAATAACATGCATGATTTATACTCAGATGTGCAAGTGTTTACC TTGGCTCTGTGAGCCACCTTCAACCTAGTAATTGAGTTTACATAAGTGGGATTTCTCTCTGGATTTTTTCTCTCAGAAAATGGAAGAGTTTGTTCTTTCA CTTGTTACCTGTGCCTATTAGTGTATATGCACATTGATCTAATCTCTCTTTCTCCTTTTTTTCTTCTTTGTTTGCAGGAAAACTGTGCCCGTGGAGGAAA TCTTAACCATTGAAATCAAACCTGGCTGGAAAAAAGGAACAAAAATAACTTTTGCAGAGAAAGGAAATGAGCAGCCAAATGTTATTGCTGCAGATCTTGT TTTCATCATTGATGAGAAACCTCACAGTGTGTTCAAAAGAGATGGTAATGATTTAGTGGCGACACAAAAGATATCGCCTTCAGAAGCTGAAGCTCTCACA GGCTACACTGTCCGTCTTACAACTCTAGATAACAAGGATCTGACCATTACCATAAACAATGTGATTTATCCAGACTATGAAAAGGTGGTCCTCAGGGAAG GTATGCCAATTCCAAAAAATCCTTCACAGAGGGGTAACCTTAGGATCAAATTCAACATTGAAGTTCCAAACAATGTTGACCCTGGTGCAGAGAGCCAGAA TTAAGAAATTTCTGATGCCATAATAGATGGACAACCACTGCAATGTGTATCTTCTGTATAATATTATTCCATTAAAGTGAGGATCAATGTATAACATTTT GTATTTACAGATTTACAGTTGATAAGGAGTACTCAAACAGTGGTGGTTTGCTGCCTTGTGTTTTATTTAGTTAAATTTTGAACAAAACAGTTATTTACTT ATATGATTATGGAAATGAATGTTATTCTCCTCTGTGCAGGGATGATGATTACTCTAAAGTTACAGGTCCAAGATTAAATCCCTGACCTTACAGCTAAAAT TCATCTAAGGACACAATCCATTACATGTATAGTAGTGGAGTACCACATGGTTGAGTGTTGATTTGACTCCATACAAGTGATATACAACAAAAGAAAGGGA AAATAATAGATTTCTGCAAAAAGAAGCAGGAACAGGAGCAATGCTAAACCATCCAGGTCCCAAGGCCACTAGTTAAAGAATACAAAAAGAGAAAGTCAGC ACTGAAAAATCAAATCCAAAATTCTCTATATGTTAAACACATCATTTTACAATAACTTTCTATTTTTGGTTAGCCAACATTCTCCATTAGTCATCATACT AATTATTCCTTCATATTTCAGAGTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_149527; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371338
| Blastp | DnaJ homolog subfamily B member 6-A from Xenopus with 55.46% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 4 from Pongo with 46.88% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (734291) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440233.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |