Ll_transcript_371343

• Id Trinity: TRINITY_DN47069_c2_g3_i3
• Name Transcript: Ll_transcript_371343
• Sequence: GGAGAATTTACCGATGCATTTTATCATGAAAACTCATTTTCTTGTGTATTATTATTCACATGTTAGAAACTCTAACATTATTGAGAGAGTAATAATTGTA GGAAGATTATTTATTAGGAGAAACATTTGAACAGTTTCCTATGTTGGTTGACTTAGTATAAGATTACTACTGAATGAGTAAATAAATAAGATGAATATTG ATATCCATAAAGAAGATAGATCACAAGTTTGAAGAAAAAGAAAGAAGAAAAAAGAGGCATGGGGGTGGAATATTATGAGTTATTGGATGTTGAAAGAAGT GGTAGTGATGAAGATTTGAAGAAAGCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAGAATCCAAACAATAAAAGAGAAGCTGAGACTAAATTCA AGCAAATTTCTGAAGCCTATGAGGTTCTAAGTGATCCACAGAAGAGAGCAGTTTATGATCAGTATGGAGAAAATGGCCTTAAAGGTGGAATGTCACATCC GGACACTGCCGGTGCTTCATTCTTCCATGCTGGGAATGGTCCAACAACATTTAGGTTCAACCCGAGAAATGCTGACCATGTATTTGCAGAATTTTTTGGG TCTTCAAGTCCATTTGGAGGAGCCGGTGTTGGTCGTGGCGGTTGTGGTGGTGGTTGTGGTGGCTATGGCAGGGGCATGAGATTTGGGAATAGTTGGGTGT CAAGGTCCTTTGGTGGAATGTTTAGAGAAGACGTGTTTGGTTCATCCGGAGAAGGCAGACCTATGAATCAAGGTGCACCACGCAAAGCACCTCCTATCGA AAATACATTGCCTTGCAGCCTTGAGGAACTTTACAAGGGGACTACCAAAAAGTTGAAGATCACAAGGGATGTTGTAGATGCAAGGGGGAAAACTGTGCCC GTGGAGGAAATCTTAACCATTGAAATCAAACCTGGCTGGAAAAAAGGAACAAAAATAACTTTTGCAGAGAAAGGAAATGAGCAGCCAAATGTTATTGCTG CAGATCTTGTTTTCATCATTGATGAGAAACCTCACAGTGTGTTCAAAAGAGATGGTAATGATTTAGTGGCGACACAAAAGATATCGCCTTCAGAAGCTGA AGCTCTCACAGGCTACACTGTCCGTCTTACAACTCTAGATAACAAGGATCTGACCATTACCATAAACAATGTGATTTATCCAGACTATGAAAAGGTGGTC CTCAGGGAAGGTATGCCAATTCCAAAAAATCCTTCACAGAGGGGTAACCTTAGGATCAAATTCAACATTGAAGTTCCAAACAATGTTGACCCTGGTGCAG AGAGCCAGAATTAAGAAATTTCTGATGCCATAATAGATGGACAACCACTGCAATGTGTATCTTCTGTATAATATTATTCCATTAAAGTGAGGATCAATGT ATAACATTTTGTATTTACAGATTTACAGTTGATAAGGAGTACTCAAACAGTGGTGGTTTGCTGCCTTGTGTTTTATTTAGTTAAATTTTGAACAAAACAG TTATTTACTTATATGATTATGGAAATGAATGTTATTCTCCTCTGTGCAGGGATGATGATTACTCTAAAGTTACAGGTCCAAGATTAAATCCCTGACCTTA CAGCTAAAATTCATCTAAGGACACAATCCATTACATGTATAGTAGTGGAGTACCACATGGTTGAGTGTTGATTTGACTCCATACAAGTGATATACAACAA AAGAAAGGGAAAATAATAGATTTCTGCAAAAAGAAGCAGGAACAGGAGCAATGCTAAACCATCCAGGTCCCAAGGCCACTAGTTAAAGAATACAAAAAGA GAAAGTCAGCACTGAAAAATCAAATCCAAAATTCTCTATATGTTAAACACATCATTTTACAATAACTTTCTATTTTTGGTTAGCCAACATTCTCCATTAG TCATCATACTAATTATTCCTTCATATTTCAGAGTGCC
• Tissue: pods
• Gene name: LI_gene_149527;
• Additional information: details;

Expression of Ll_transcript_371343

FPKM

• PAB: 18.2
• PNAB: 43.2
• PS1: 32.9
• PS2: 19.1
• PS3: 27.1
• PW1: 44.2
• PW2: 40
• PW3: 37.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371343

• Blastp: DnaJ homolog subfamily B member 4 from Pongo with 43.68% of identity
• Blastx: DnaJ homolog subfamily B member 4 from Pongo with 41.48% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (100174554)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440233.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;