Ll_transcript_372438

• Id Trinity: TRINITY_DN47071_c0_g1_i2
• Name Transcript: Ll_transcript_372438
• Sequence: ATGGGATTTACTTATAAGTTATAACCCCTAACCTAAAACCTCAATCCATCGCCACCACCCTTCTCTCTATCGCCACCGTATATTTCTCCATCACCACCGT ATATTTCTCCATCACCACCGTGCACCTCTCAGTAGCATCCACCATCAACAACCATCAAAAACCACCAATCAGAAGAGATGACCCGCGGCATAAAACACCG AATGAAAGCCAAGAGAAAGAACAAGGTGTCAAAGAAAGGAGAAGGGTCATCTTCATCATTGGGGCCACAAGTTCCAGTGAAAGTGTGGCAACCAGGTGTG GATAAGTTGGAAGAAGGTGAAGAGCTTCAATGTGATCCTTCTGCTTATAACTCTCTTCATGCCTTTCATATTGGATGGCCTTGTCTCAGCTTCGATATTG TTCGTGACACTTTGGGCTTAGTTCGAACTGAGTTTCCCCATACAGTGTATTTCATGGCAGGGACTCAGGCAGAGAAAGCTTCTTGGAATTCTATTGGAAT TTTTAAGGTAACAAATATTTCTGGGAAGAGACGTGAACCATTGCCTAAACTTAAAGGTGATGAAGCTGGAACGGATGATGATGAAAGTGATAGTGAGGAT GATAGCGAAGATGAAGATGAAAATGGTGCTCAGGGTCCCATTTTGCAGTTGCGGAAGATAACTCATGAAGGATGTGTCAACCGTATACGCTCCATGACAC AAAATCCTCATATCTGTGCAGCTTGGGCAGATACTGGTTATGTGCAAGTGTGGGACTTAAGCACTCATCTTAATGGTCTAGCTGAGTCAGAAACAGAAGG TGTCCAAGGATCTGCTGCCGTTTTTAATCAAGACCCGTTATTTAAATTCAAGCACAAAGATGAAGGCTTTGCTATAGACTGGAGTCCTCTTGTTCCTGGA AGGCTTGTATCTGGGGATTGCAAGAATTGTATTTATCTGTGGGAGCCTACATCTGCTGCAACTTGGAACGTTGACAATACTCCATTTATTGGACATACGG CTAGTGTCGAAGATATACAATGGAGTCCTACGGAACCTCATGTTTTTGCTTCTTGTTCTGTGGATGGGAGCATTGCAATATGGGATACCCGTTTGGGGAA GTCTCCAGCTGCGTCTTTTAAAGCACATAACGCGGATGTGAATGTAATGTCATGGAACAGGTTGGCAAGTTGTATGTTGGCCTCGGGAAGTGATGATGGG ACTATTTCTATCCGTGATCTCAGATTGCTCAAGGAAGGAGATTCTGTGGTAGCACATTTTGAATATCATAAGCACCCAATAACATCCATCGAGTGGAGTC CACATGAAGCCTCTTCATTGGCTGTTTCGTCATCCGATAATCAGCTTACGATATGGGACCTTTCTTTAGAAAAGGACGAGGAAGAAGAGGCTGAATTTAA AGCTAAAACCAAAGAAGAAGTAAATGCTCCTCAAGATCTGCCTCCTCAGCTATTGTTTATTCACCAGGGACAAAAGGACCTGAAAGAACTACATTGGCAC ACACAAATTCCCGGAATGATCGTGTCTACTGCGTCGGACGGATTCAACATCCTTATGCCTTCAAACATTCAGAGCACCCTACCATCGGATGGTATTTGAT ACAATGCAGTTTTCAAGCAAAACATGCTTCACTCACTATTCCATTGTTTTCATTTCTTTCTTCTCCCTTCAAGTTTTGTTATATTTGATTAGAGCTTTTG CAGACATAATAGGAGCCATGCAAAAAATTTACATGCATACATTGCTTGCATAATTTTTATGTTGTGAAGTCTTCTTTTAATGTTATATAAATGATATGGA GCTAGCCTTTGCACCTATGACTGAAATTTGAGGGAAACTTGAGCAAAAGCTGAGTAGAAAGAAGTTAGAAATGGAAGAAAACAATAACCATGTTGAATGT GAA
• Tissue: pods
• Gene name: LI_gene_149537;
• Additional information: details;

Expression of Ll_transcript_372438

FPKM

• PAB: 1.1
• PNAB: 11.7
• PS1: 7.6
• PS2: 7.2
• PS3: 10
• PW1: 7.5
• PW2: 7.3
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372438

• Blastp: Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 46.76% of identity
• Blastx: Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 46.08% of identity
• Eggnog: Glutamate-rich wd repeat-containing protein(ENOG410XPDB)
• Kegg: Link to kegg annotations (DDB_G0291566)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463902.1)
• Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex (PF12265.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;