| Id Trinity | TRINITY_DN47071_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_372440 |
| Sequence | CTGAGTGTGACACTGGTAACACCTAACCTAAAACCTCAAACGAGCCACCACTCATTTTTCCCACCGCCACCGCGCGCCGCTCTGCATCATAACCCATAAT CAACAACCATCTCAATTGTGAAGGAGTAAAAAATAATCAGAAAAAATGACTCGAGGCATAAAACACCGTATGAAAGCAAAGAGGAAGAACAAGGCATCAA AGAAAGGGGAAGGGTCTTCTTCTCTGGGGCCACAAGTTCCAGTGAAAGTGTGGCAACCAGGTGTGGATAAGTTGGAAGAAGGTGAAGAGCTTCAATGTGA TCCTTCTGCTTATAACTCTCTTCATGCCTTCCATATTGGATGGCCATGTCTCAGCTTCGATATTGTTCGTGACACTTTGGGCTTAGTTCGAACTGAGTTT CCCCACACGGTGTATTTCATGGCAGGGACTCAGGCAGAGAAAGCTTCCTGGAATTCAATTGGAATTTTTAAAGTAACAAATATTTCTGGGAAGAAACGTG AACCGGTGCCTAAAATTGAAGGTGATGAATCTGGAATGGATGATGAGAGTGATAGTGAGGATGATAGTGAAGATGAAGATGAAGATGAAAATGGTGCCAA GGGTCCCACTTTGCAGCTGCGAAAGGTAGCTCATGAGGGATGTGTCAATCGTATACGCTCCATGACACAAAACCCTCATATTTGTGCAGCTTGGTCAGAT ACTGGTTATGTACAGGTGTGGGACTTGAGCACTCATCTGAATGGCCTAGCCGAGTCAGAAACAGAAGGTGCCCAAGGAGCTGCTGCAGTTTTTAATCAAG ACCCGCTATTTAAATTTAAGCACAAAGATGAAGGCTTTGCTATAGACTGGAGTCCTCTTGTTCCTGGAAGGCTTGTATCTGGGGATTGCAAGAATTCTAT TTATCTGTGGGAGCCTACGTCTGCTGCAACATGGAATGTTGACAATACTCCATTTATTGGACATACTGCTAGTGTTGAAGATATACAATGGAGTCCTACA GAACCTCATGTATTTGCTTCTTGTTCTGTGGATGGAAGCATTGCAATATGGGATATCCGTTTGGGAAAGTCACCTGCTGCGTCTTTTAAAGCACATAACG CAGATGTGAATGTAATGTCATGGAACAGGTTGGCTAGTTGTATGTTGGCCTCAGGAAGTGATGATGGGACTATTTCTATTCGTGATCTGAGATTGCTCAA GGAAGGAGATTCTGTGGTAGCACATTTCGAATACCATAAGCACCCAATCACATCCATTGAGTGGAGTCCACATGAGGCCTCTTCATTGGCTGTTTCGTCA TCCGACAATCAGCTTACAATATGGGACCTTTCTTTAGAAAAGGACGAGGAAGAGGAGGCTGAATTTAAAGCTAAGACCAAAGAAGAAGTAAATGCTCCTC AAGATCTGCCTCCCCAACTATTGTTTATTCACCAGGGACAAAAAGACCTGAAGGAGCTACATTGGCACACACAGATTCCCGGAATGATCGTGTCTACCGC TTCAGATGGATTCAACATCCTTATGCCTTCAAACATTCAGAGCACCCTACCATCAGATGGTGCTTGATAATACATATTTCTGATAGATATTGTTATTATA GTTTGGATAAGCTGGTCCTGGTTCAAGGATCCTGAAGCTCCATGGATGTTGAAGAATTTTTTCCTTTTGTTTTTGGTCTTGGTTCTTTCCATTTCTTTTT TCTCCCTTCAAGTTTTGTTATATTTGATTATGGAAGGCTCATAGCACTTTTTATGTTTTGTTATATTTGAGTAGAGCTTTTGCAGACATGATGTGAGCTA GGCAAAAAATTTACATGCATACTTTGCTTGCATAATTTCTGTTGGGTGTTGAAGTGTCTTCTTAATGTTATATGATATTTGAGTTAACCTTTTCAACTAT GGTTGAGAAGAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149537; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372440
| Blastp | Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 48.5% of identity |
|---|---|
| Blastx | Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 47.59% of identity |
| Eggnog | Glutamate-rich wd repeat-containing protein(ENOG410XPDB) |
| Kegg | Link to kegg annotations (DDB_G0291566) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463902.1) |
| Pfam | Histone-binding protein RBBP4 or subunit C of CAF1 complex (PF12265.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |