Ll_transcript_372172

• Id Trinity: TRINITY_DN47076_c1_g1_i14
• Name Transcript: Ll_transcript_372172
• Sequence: CTGATCATTTACTACTGCTCTGTACTGATGTGTAGCTGTTACTGCTGTTTTGAGGATTATTATGTTGTTATTGCGTTTGTATCTGAGACTGCACATGTAT CTTTTAACTATGATTGTCTAACTGCTTGGAGCTGATGCAATGTCTATTTCTGGTCTTTATAGGATTGTTCAGGTATCAATGAATCATACATCTTTCATAC TTGTTTATGGCTAGTAGCTAATATGCTTGTAAAGTTTTCCTTCTGATTTTTCTTCCTCGCTTACTTTTCTTTTTAGGAACTTATTAAAGATCAGGTTGCG AAAAATGTATTTGTGGCCTAAGGCTCTAGAGGTGCAAATAATGGATCCAGCAAAGGATGTTGCTGTTTTTAATGCGATGATTGATCGGTATGTGAAGTTG GGGTGTATGGAGTTGGCTAAGGATTTGTTCGATAGAATGGTAGATAAGAATGTGATTTCTTGGATTAGTATCATTTATGGGTATTGCCAGAATGATGCTG TTGATTCTGCTAGGTTGATGTTTGATGTTACGAATGAGAAGACTGTGTTTACTTGGAATGCTATGATAGGGGGATATTGCCATAATAAACGGTCGCATGA GGTGTTGAGGTTGTTTCGTAAGATGCAGTTGAGGGCGTCTATGGAACCGAATGAAATAATTGTGTCCAGTGTTCATCTTGTTATTGCTGATTTGGGTGCT TTGGATTTGGGTGGGTGGATTCACAGGTTTGTCCATATGAAGAGGCTTGATAGATTTGTTAATGTCTGCACCATGCTTGTTGATATGTATGCAAAGAGAA TGATCAGAAGGAGAAATTAGAAGGACTGGTAATGTAATGGTCATGCAGATCAAAGGGTCAAGATCAAGGGAGACAGAAAACGGGGAATTCATCTTTAGTG CTTTGTCTCATCTTGTTTTCTTTGGGATTCCTCTTTAAGATGGAAGGTTGTGCTTTTTAGTGCCTGTTAAGATTAGCTCTTGTTTATGAATCATGCGAAA TGCTCCATTTGTTCAACTACCATTTTGGATCTAGCTGTAAATAAATATGACAAGGTGGCAGTTCATGTATAGACAAATAAAAGTTGTTGTCTGAGTTAAC TTTGTACAGGCTTAAGTAATGATTGCCTTCTCTTTGGATCAAATAAAGAATCATTGTTTGATATATATGTGAAGACATTTAAGGATATATTTCATTTTGT TATGATCCTCACAACCTTAAACACGCGGAGTAATGATTTAAGCG
• Tissue: pods
• Gene name: LI_gene_149572;
• Additional information: details;

Expression of Ll_transcript_372172

FPKM

• PAB: 15.4
• PNAB: 20.4
• PS1: 22.1
• PS2: 27
• PS3: 27.7
• PW1: 23.8
• PW2: 30.5
• PW3: 35.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372172

• Blastp: Pentatricopeptide repeat-containing protein At2g44880 from Arabidopsis with 48.03% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g44880 from Arabidopsis with 48.03% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G44880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413271.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;