Ll_transcript_372174

• Id Trinity: TRINITY_DN47076_c1_g1_i16
• Name Transcript: Ll_transcript_372174
• Sequence: TTTGAATTGATTTGATATATAAAATTATTCTTGATTAATAGTATACGATATTTGTACCAAGTGTGCAATCCAATTATGGAAAAAAATCCTCATAATATAT GCATGAAGAAAAGATTTAGGCACCTTTATATTGAGCTTAATGGGTATAATCATAAATAAAAAGATTACACTATCACTTGTAGTAACATAGCATATGAATG AGTGGATAATGTTTGGCTTTGGAAAAAATAAATTGTAAGATTTTGAACAGATATTAATGCATCAAGTACAAAAAAAAATTTCCTTTACAGTTTCTTGTCT TTTTCTACTTATGTCCTATGCACTTAAAGTGATTTCTGATCCACAGAAAGAGGCTACACTGAGAGTACTTAATATTTGTTGAGTATGTTTAATTTTGAAG GTTCTACTTTGGATATGGAACCAAGTTAACTACCTCCACTTTCCCCTTTCCACATTGAAGAAAGAAATTATAAAGGTGGAATTTTTATACAAAGATAATA CTGAAGATGGGTTTTTTTAGCACCATAGCTAGTTTTGTTGGATTTGGAATAGGAACTACACTTGGGTTAGTCATTGGGTACTATTTGTTCATATACTTTC AAACAACAGATGTCAAGGTTTCTCTCTCCATCTCATATTTTTGTAGCCAATTGTCTTATATTTTGTTGTTGTTGTTGTTTGTTTTCATTGTTTGGATTGG TTATGTTATTTGAGTTATATATCATTTTCTTACTTTCTTGGTTTGCTGAATTATAATATATCTTGTATTACTTTTTGGAAGGTTGAATGGGTTAACATCT TCTGATCTTTACTTTTTTTGTTGGACTTTTTTGTGAGAAAAAATGAAAATGAAAAGGCCTAGTGCATGATAATATAGATCTGTTAAACAAAGTGAAGAAC TTACTCATGTTAAAGTCTTTCATCTTCATTGTATAGGAATCATGTTTTGACTTCATCACAAGATTCACTTCACCCCTTGTTGTTCTTGATAAGATGCTAT AGCTGTGTTGTTCTTTTCTTGCAATCATGAATTATTTGTTCAATCTATCAAAATTTAACTAAAACTGTTTTTTCTGCTGTTAAATTTTGAAAACATTGTG AAACTTTTTATTATGGACTTCATGTTCTAGAGGGGATTTTTGAACATTGAGAGGATTTCTGAGAGTAATGGTATGTCTATGGAAATGATTCATATAGCCA ACCCCACCTAATGGAAAAAGCTTTGCTTGTCGTCGTGTTGTTGAGAGGAATTTCAGAGAGTGCTGAAACCTGAAACTCCTCCGGTGTGGAGAAATAGTCT TAAGCATAGTTACATGGTTCGCTCATTTAATTTTGGTTCCTTTACTAGTTGGGTTTTGGAAGGGAATGAAAGGTTTCAGAGTCATCTCACAAGTATACTT CATGACCATTCTCTCCTTCCAAAACCTAACACATAAACAAACTCTTACGTATTGCACACTGATACTACTCAAACTAGTATCGGTATCACGTACCATGTAA CTTCCATTTTTATCTAGATAGTGGATTATGTAACTGTGTAATGAAATAATTCTTCTGTGCCTTATCCTCTCTATGTTAAATCACAAATTTCAAGCTGAAT TCTTACAACAAAAGTTATTCATAATTGTTAGAACTCACAGTGAAGGGCCTGCATGGAATCTATTACCTTCTCTTTTAGTTATCAACACTTCAAATTATGG CATTCTTGATTTCAGGATCCCACCATTCGTCCTTTGGCTGAGCAAGATTCAAAAACTCTGCAACAGTTGCTTCCAGAGATACCAGTTTGGATTAAAAATC CGGACTATGATCGTGTACGTTATTCTTTAAAATCGTATGCCTTTTTTTGTATAACCACGGGTATTCCTCACCCAATGGCTAAGGAACTAATCTTTTTCCG GTGCGTGATTGCTCTCACAATAAGTGTCGTTCTCAGTAAATATCTTCGGAACCAGAAGTGCATTATGGGTTCAACAGAAAATTTATCATATTTTCTTCTT TGCAGCTTGACTGGCTTAACAAATTTATTGAGTGTATGTGGCCTTATTTGGACAAGGCAATTTGCAAGACTGCAAGTACTATAGCAAAGCCTATTATTGC TGAGCAAATTCCGAAGTACAAAATTGATTCGGTCGAATTCGAAACACTTTCCCTGGGTTCTCTACCACCAACTTTTCAAGGAATGAAAGTTTATAGTACT GATGAAAAGGAATTGATTATGGAAACATCATTGAAGTGGGCTGGGAATCCTAACATTATAATTGCAATTAAAGCATTTGGATTGCGAGCCACGGTCCAGG TTGTTGATCTGCAAGTATTTGCTGTTCCACGTATCACTCTGAAGCCTTTAGTTCCAAGTTTTCCTTGTTTTGCAAATATTTACGTGTCTCTTATGGAGAA GCCGCACGTAGATTTTGGGCTCAAACTGCTTGGAGCTGATGCAATGTCTATTCCTGGTCTTTATAGGATTGTTCAGGAACTTATTAAAGATCAGGTTGCA AAAATGTATTTGTGGCCTAAGGCTCTAGAGGTGCAAATAATGGATCCAGCAAAGGCCATGAAAGTGCCTGTTGGAATCCTTCATGTGAAGGTTCTGAAGG CAGTGAAGCTTAGAAAGAAAGATCTAATGGGGGGAGCAGACCCGTATGTGAAACTTAAACTCACAGATGATAAACTTCCTTCAAAGAAAACAACTGTGAA ATACAAGAACTTGAATCCGGAATGGAATGAGGAATTTAAAGTAGTGATCAAAGATCCGGAATCTCAAGCCTTAGAGCTTAGTATCTTTGACTGGGAGCAG ATTGGCAAGCATGACAAGATGGGTATGAATATCATTCAATTGAAAGAACTTACGCCCGATGAACCGAAAGTGCTGACTCTTAATTTACTCAAGACTATGG ACCCTAATGATCCTGAGAATGTCAAGCCAAGGGGGCAGCTCACTGTGGAAGTTCTGTACAATCCTTTTAAGGCCGATGAATTACCTGAGAATGCAGAAGA CGGCAATCCAATCGAAAAGGCTCCTGATGGAACACCTGCTGGTGGTGGTTTGCTTGTAGTTATCATCCATGAAGCTGAAGATGTAGAAGGAAAACATCAC ACAAATCCGTATGCACGACTGACTTTTAAAGGAGAGGAGCGAAAAACAAAGCATATAAAGAAAAATAGAGATCCAAGATGGGGTGAAGAGTTTCAGTTTA CACTGGAGGAACCCCCAACCAATGAGAAACTATTAGTTGAAGTGCAAAGTGCCTCATCAAAGATGGGATTGCTGCATCCTAAGGAAAATCTGGGTTATGT GCATATAAATCTATCTGATGTTGTTAGCAACAAAAGAATCAATGAGAAATATAATCTTATCGACTCAAAAAACGGACGGATTCAAATTGAGCTTCATTGG AGAACTCGATGATGATTGGCGGGTAAAAATCAGTCACAAAAATAAATTTGTAGTGTGCATAATTTTGTGAAACATTCCTTCTTAGGGAGGTACCTGTGTT CTGTCACAGAAAATTTCTGTTATGTATTGTTTAAACATTAATAAGTATCTTATGGGACATTACTCTATTTTTCATTGTTGGTATGAGGATCTGAGCTATT AACTAAAATCATCAAGCCTTGCCTAAAGAAATCTGAATTGTTAGGTTCCAAAATATGATTGTTATTGGTGGGTGGATTTATAAGTAGTGTATAAACTGGG GAGGAGCAACATGGTGATTAGGAATATGCACATGCACAGGTTGGATTTTTTTTGGAACTTTTTTATAGCTTTACCCTTAACCCTATAATTCTACAAGCCT ACATCAAAAGTAGGAACCTATGACCCACAAGCACAAGGTAGAAACATGAGGTTAAGG
• Tissue: pods
• Gene name: LI_gene_149572;
• Additional information: details;

Expression of Ll_transcript_372174

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.5
• PW1: 0.1
• PW2: 0.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372174

• Blastp: Synaptotagmin-2 from Arabidopsis with 74.4% of identity
• Blastx: Synaptotagmin-2 from Arabidopsis with 74.09% of identity
• Eggnog: Domain-Containing protein(COG5038)
• Kegg: Link to kegg annotations (AT1G20080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433884.1)
• Pfam: Synaptotagmin-like mitochondrial-lipid-binding domain (PF17047.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;