Ll_transcript_372166

• Id Trinity: TRINITY_DN47076_c1_g1_i9
• Name Transcript: Ll_transcript_372166
• Sequence: CTGATCATTTACTACTGCTCTGTACTGATGTGTAGCTGTTACTGCTGTTTTGAGGATTATTATGTTGTTATTGCGTTTGTATCTGAGACTGCACATGTAT CTTTTAACTATGATTGTCTAACTGCTTGGAGCTGATGCAATGTCTATTTCTGGTCTTTATAGGATTGTTCAGGAACTTATTAAAGATCAGGTTGCGAAAA ATGTATTTGTGGCCTAAGGCTCTAGAGGTGCAAATAATGGATCCAGCAAAGTATGTATTATTTCTTCCTTTCATGAGTTTATAACATTGAGATTGAGTGG CTAATTTTGATTTGATGCCTTATAGGGATGTTGCTGTTTTTAATGCGATGATTGATCGGTATGTGAAGTTGGGGTGTATGGAGTTGGCTAAGGATTTGTT CGATAGAATGGTAGATAAGAATGTGATTTCTTGGATTAGTATCATTTATGGGTATTGCCAGAATGATGCTGTTGATTCTGCTAGGTTGATGTTTGATGTT ACGAATGAGAAGACTGTGTTTACTTGGAATGCTATGATAGGGGGATATTGCCATAATAAACGGTCGCATGAGGTGTTGAGGTTGTTTCGTAAGATGCAGT TGAGGGCGTCTATGGAACCGAATGAAATAATTGTGTCCAGTGTTCATCTTGTTATTGCTGATTTGGGTGCTTTGGATTTGGGTGGGTGGATTCACAGGTT TGTCCATATGAAGAGGCTTGATAGATTTGTTAATGTCTGCACCATGCTTGTTGATATGTATGCAAAGAGAATGATCAGAAGGAGAAATTAGAAGGACTGG TAATGTAATGGTCATGCAGATCAAAGGGTCAAGATCAAGGGAGACAGAAAACGGGGAATTCATCTTTAGTGCTTTGTCTCATCTTGTTTTCTTTGGGATT CCTCTTTAAGATGGAAGGTTGTGCTTTTTAGTGCCTGTTAAGATTAGCTCTTGTTTATGAATCATGCGAAATGCTCCATTTGTTCAACTACCATTTTGGA TCTAGCTGTAAATAAATATGACAAGGTGGCAGTTCATGTATAGACAAATAAAAGTTGTTGTCTGAGTTAACTTTGTACAGGCTTAAGTAATGATTGCCTT CTCTTTGGATCAAATAAAGAATCATTGTTTGATATATATGTGAAGACATTTAAGGATATATTTCATTTTGTTATGATCCTCACAACCTTAAACACGCGGA GTAATGATTTAAGCG
• Tissue: pods
• Gene name: LI_gene_149572;
• Additional information: details;

Expression of Ll_transcript_372166

FPKM

• PAB: 16.1
• PNAB: 6.8
• PS1: 5.8
• PS2: 4.8
• PS3: 8.6
• PW1: 8.1
• PW2: 4.4
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372166

• Blastp: Pentatricopeptide repeat-containing protein At2g44880 from Arabidopsis with 48.03% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g44880 from Arabidopsis with 48.39% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G44880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413271.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;