| Id Trinity | TRINITY_DN47077_c2_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_372616 |
| Sequence | AGTTCGTGCCAATATGAGAGCGGGAGGACTGACAGATTCGGCAGTAGTATCATCTTTACTTGAGTCGGTGGAAAGTTCTGATCTTATTGCATATGGCCTC ATACCAGAGTTTATTGGACGATTTCCCATCTTAGTCAGCCTGTCAGCTTTAACTGAAGATCAACTTATGCTGGTATTCCTTCATTGTTTATCTTAGCTTT TCCCGATTTCTCTAAGCATTTCAGTGCTCCAAGCACTAATTCTTCTGGTGTCTTGGCTCTGATGATCAAATGCCCTACTTAGGGCATTGTATATATGTTG GTTTACAGTTTCGACTTGTTAAGACGTTGAATGCTTAGTTTTAAATGCATGTAGGAAAGCCTGCTTTTCGAAAGGGTTACAGTTATTTTTTATTTTAGGT TTTGAACAGATATATTGTCATATGATATAAAAAATATTGTCGATTTACAGGTCCTTACAGAGCCGAAAAATGCTCTTAGTAAGCAGTACAAGAAATTATT TAGCATGAATAATGTAAGCATTTCCTTCTCTCTCTCTCTCCCCCGCGCCCCTCTCTCTCTCTCTCTCACATGTGTGCTCTGTGTGTGTGGCATACCATTT CTAGTGATGATTCGCTGACTTAACATATTTTATTTTAACTTTTTGTATAATTAATTACTTGCAGTCTCCCTCTCGCCTCTAGTAATTTCTTTTTATATAA TTCAAATCCTGGAAACAAGTAAAGTACTTGCGAGGGTAAGGTTATGTACATATACTCTCCTCGGACCCCACTAGATAGGAGCCTCATGCATTGAGCTGCC CCTTTTCTTTGTTGATGTTGAGTGTAGCCTGCCTCAAAGCCATTGCCTGCCGATATCTTTTGCCGTTCTACATTTAAACATGACTGAGAAACCTGATAAA AAAACCGTGGATGAATTGGTTTGTTAAGGTTTTTGGCTCTTTGATAAGTCAAAATTGGTAAACTTGTTTCATTTTTGTGTGCAAATCATTTAAATTTACC TGTCTATGTGCCTTTTCATTTGTTTATTCATTCATTCAAGTGAGTGCAAGTGTGTAACTGGGAGAGTGGGCAGTAATATAGGTCTTATTGTCTGAATCTT TACACTTCAGGTTAAGCTATACTTCACAGAGAAAGCTCTAAGATTAATTGCGAAGAAAGCTATGGCCAAAAATACTGGTGCCAGGGGTTTAAGAGCCCTA TTGGAAAGCATTTTAACCGAAGCCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149586; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372616
| Blastp | - |
|---|---|
| Blastx | CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 77.05% of identity |
| Eggnog | ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219) |
| Kegg | Link to kegg annotations (AT5G53350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014624575.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |