Ll_transcript_372620

• Id Trinity: TRINITY_DN47077_c2_g4_i1
• Name Transcript: Ll_transcript_372620
• Sequence: TATCTCCCAACCCTTTTTTGCTCTTTTCCTTTCAAAGGTTCAATTCTGTTCTTCTTTTCTTCTTCTTTCGCTTCTCTCAATATTAACTATTTTTCTTGAA TTGCGTGATTTCTGATAAAGGGTTTCTTTTTTTATTATAGATAAACTCGAAATTGTTTCAAAGTTTTGAACTTTGTGTCCTTTTTTTTTCATTCGATGAG CTTTTTTGATGAAATCATGGATCCGAAGTTTTTAATGAAAATTATTCACCTTTCATTGTTGTTTCATTTTTGGGGTTCTGTGTTTGTCTTTGTTATGCAT AATTCTTAGAAAAACAAAGGATGATGATCAAGTAAGATAAATTATGTGCTATCTCTATGCACTATTTGGTTTAAAGATGTCAAATTTAAATGTGTAAATT TGAAAAGTGAATTTTTTTATTCTTTTGGTTACATAATTTAATTTAATTCTGCTGTTTTTTTGTTTGTAATATGTTTTCATTCATCTGGGTCACTCTATTT GGAGCATATGAAAGGTTGGATCTTGAATACTTTAGCATATAAAATTTTACTACAGTGTTGTCAACTTGTCATTATTCAATATTTTATACATAAATTTTGT ATCTTTGTTCAGTTTTATTCCTTCACTTTTCTAATTTTCTTAAACATGTCTCTTACTCTCATAAATGCTTCAAAATAAAAACATGGGATTGTTTAAAATT TCTTCTTAGGTTATCCTATTCACTTACTTTTATTTCTGGCTATGATTTTGATGAATAGTGAGTGATATTTTCATTTACAGAATTGAAATATGGGTCAAGC ACTTGGTTGTTATCAAGTTGATCAGTCAAATGTGGCAATAAAGGAACATTTTGGAAAATTTGATGATGTTTTGCAACCTGGATGTCACTGTTTGCCTTGG TGTCTTGGTTACCAAATAGCTGGTGGTCTTTCACTTCGTGTGCAGCAACTTGATGTTAGGTGTGAAACCAAGACTAAGGATAATGTCTTCGTCACCGTGG TTGCATCTGTACAATACCGAGCTGTGGCTGAGAAAGCATCTGATGCCTTCTATAGGCTCACCAATACAAGGGAACAGATTCAATCTTATGTTTTTGATGT TATCAGGGCTAGTGTGCCAAAGCTAGAGTTGGATTCTGTCTTCGAGCAAAAGAATGATATCGCAAAGTCTGTTGAAGATGAGCTTGAAAAGGTGTTCATT GTTCTCATGTTCTGTACAATATTGTTCTATCTTTTTCTTATTTGTATGAAATCTTACCTTTCACTATCAGTTAAGGTTGTAATGGTCCATATTAATAATT TAATTCAACGTTAATGTCGTAGGCAATGTCTACTTACGGATACGAGATCGTCCAAACTCTCATTGTTGATATAGAGCCTGATGTTAATGTCAAGAGAGCA ATGAATGAGATTAATGCAGCTGCTAGAATGAGGCTGGCTGCGAACGAGAAGGCTGAAGCAGACAAAATACTGCAGATCAAGAAAGCTGAAGGAGAGGCAG AGTCCAAATATCTGTCAGGACTCGGTATAGCTCGCCAACGCCAAGCCATCGTGGACGGGCTTAGGGACAGCGTGCTCGCGTTCTCCTCGAATGTGCCCGG AACAAGTGCTAAAGATGTGATGGACATGGTGCTGGTGACTCAATACTTCGACACCATGAAGGAAATCGGAGCATCTTCAAAATCCTCATCTGTGTTCATA CCACATGGTCCGGGCGCGGTGAGGGACATTGCGGTGCAGATTCGAGATGGTCTCCTTCAGGCCAGTGCTTCCCAGACTTGAAATTAATCTCTCCTGGATC TGTATATAATAAAATTATGGGTTTTCTGGTGAATTGTTTATTATAGATTAGGGAGATACTTTCTTTGCATTGAATGTTTGTTTTTGCTGTTTATATTATA CTGATGAGGTGTGATACTAATTTGGAACGAGTTTAAAATTTGTACACTGACGGTGTAAACTTTTTTGCACAGTCAGTGCATCATTCACCATTGATTTATA TTACTTTTGTTTTAGAGTCAATGAAAGTTAACAAATCAATGGTGGTGATTCACTGGCAGTGTAAAAGACACATACATTGTCGGTGTATGCATATTAAACT CATTTGGAACTATGTTTGTTTATCCAGAAATATAGTCTTAATGTCAAGTTTCTAAGAAGTTAATGTTATTTAAGGTTTGATATAAGAATTGCTCTTCAAA AAATTGATTTCCTTCGTAGCTACTAAAACCCTTTCTAACATTATTTATGTGATTTAAATATCCGGCATGGGTATTGTGTTACTCGTACATGCGGATAGAC ATTATTTATGTGATTGTGATATTACCCTTAATTAAAAT
• Tissue: pods
• Gene name: LI_gene_149587;
• Additional information: details;

Expression of Ll_transcript_372620

FPKM

• PAB: 2.8
• PNAB: 0
• PS1: 0.7
• PS2: 0.3
• PS3: 0.8
• PW1: 0.6
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372620

• Blastp: Hypersensitive-induced response protein 2 from Arabidopsis with 84.56% of identity
• Blastx: Hypersensitive-induced response protein-like protein 1 from Oryza sativa with 86.84% of identity
• Eggnog: Band 7 protein(COG0330)
• Kegg: Link to kegg annotations (AT1G69840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014516949.1)
• Pfam: SPFH domain / Band 7 family (PF01145.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;