| Id Trinity | TRINITY_DN47077_c2_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_372621 |
| Sequence | TATCTCCCAACCCTTTTTTGCTCTTTTCCTTTCAAAGGTTCAATTCTGTTCTTCTTTTCTTCTTCTTTCGCTTCTCTCAATATTAACTATTTTTCTTGAA TTGCGTGATTTCTGATAAAGGGTTTCTTTTTTTATTATAGATAAACTCGAAATTGTTTCAAAGTTTTGAACTTTGTGTCCTTTTTTTTTCATTCGATGAG CTTTTTTGATGAAATCATGGATCCGAAGTTTTTAATGAAAATTATTCACCTTTCATTGTTGTTTCATTTTTGGGGTTCTGTGTTTGTCTTTGTTATGCAT AATTCTTAGAAAAACAAAGGATGATGATCAAGTAAGATAAATTATGTGCTATCTCTATGCACTATTTGGTTTAAAGATGTCAAATTTAAATGTGTAAATT TGAAAAGTGAATTTTTTTATTCTTTTGGTTACATAATTTAATTTAATTCTGCTGTTTTTTTGTTTGTAATATGTTTTCATTCATCTGGGTCACTCTATTT GGAGCATATGAAAGGTTGGATCTTGAATACTTTAGCATATAAAATTTTACTACAGTGTTGTCAACTTGTCATTATTCAATATTTTATACATAAATTTTGT ATCTTTGTTCAGTTTTATTCCTTCACTTTTCTAATTTTCTTAAACATGTCTCTTACTCTCATAAATGCTTCAAAATAAAAACATGGGATTGTTTAAAATT TCTTCTTAGGTTATCCTATTCACTTACTTTTATTTCTGGCTATGATTTTGATGAATAGTGAGTGATATTTTCATTTACAGAATTGAAATATGGGTCAAGC ACTTGGTTGTTATCAAGTTGATCAGTCAAATGTGGCAATAAAGGAACATTTTGGAAAATTTGATGATGTTTTGCAACCTGGATGTCACTGTTTGCCTTGG TGTCTTGGTTACCAAATAGCTGGTGGTCTTTCACTTCGTGTGCAGCAACTTGATGTTAGGTGTGAAACCAAGACTAAGGATAATGTCTTCGTCACCGTGG TTGCATCTGTACAATACCGAGCTGTGGCTGAGAAAGCATCTGATGCCTTCTATAGGCTCACCAATACAAGGGAACAGATTCAATCTTATGTTTTTGATGG TACATAGAGAGACTATTCTGCTTCATTCTATTTTATAAATGCTATATACCTGCAATTACACATGTGGTTGCGAATCGTGTATCATTTTACTTTTCGGTGC TGTATATTATATAGCACCATTGATCATTGTATTGTATTTTTGTGTTTGGCTTTTTTTCTTTATAAGATGCTAATATTTTGCATTTCTTCAGTTATCAGGG CTAGTGTGCCAAAGCTAGAGTTGGATTCTGTCTTCGAGCAAAAGAATGATATCGCAAAGTCTGTTGAAGATGAGCTTGAAAAGGCAATGTCTACTTACGG ATACGAGATCGTCCAAACTCTCATTGTTGATATAGAGCCTGATGTTAATGTCAAGAGAGCAATGAATGAGATTAATGCAGCTGCTAGAATGAGGCTGGCT GCGAACGAGAAGGCTGAAGCAGACAAAATACTGCAGATCAAGAAAGCTGAAGGAGAGGCAGAGTCCAAATATCTGTCAGGACTCGGTATAGCTCGCCAAC GCCAAGCCATCGTGGACGGGCTTAGGGACAGCGTGCTCGCGTTCTCCTCGAATGTGCCCGGAACAAGTGCTAAAGATGTGATGGACATGGTGCTGGTGAC TCAATACTTCGACACCATGAAGGAAATCGGAGCATCTTCAAAATCCTCATCTGTGTTCATACCACATGGTCCGGGCGCGGTGAGGGACATTGCGGTGCAG ATTCGAGATGGTCTCCTTCAGGCCAGTGCTTCCCAGACTTGAAATTAATCTCTCCTGGATCTGTATATAATAAAATTATGGGTTTTCTGGTGAATTGTTT ATTATAGATTAGGGAGATACTTTCTTTGCATTGAATGTTTGTTTTTGCTGTTTATATTATACTGATGAGGTGTGATACTAATTTGGAACGAGTTTAAAAT TTGTACACTGACGGTGTAAACTTTTTTGCACAGTCAGTGCATCATTCACCATTGATTTATATTACTTTTGTTTTAGAGTCAATGAAAGTTAACAAATCAA TGGTGGTGATTCACTGGCAGTGTAAAAGACACATACATTGTCGGTGTATGCATATTAAACTCATTTGGAACTATGTTTGTTTATCCAGAAATATAGTCTT AATGTCAAGTTTCTAAGAAGTTAATGTTATTTAAGGTTTGATATAAGAATTGCTCTTCAAAAAATTGATTTCCTTCGTAGCTACTAAAACCCTTTCTAAC ATTATTTATGTGATTTAAATATCCGGCATGGGTATTGTGTTACTCGTACATGCGGATAGACATTATTTATGTGATTGTGATATTACCCTTAATTAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149587; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372621
| Blastp | Hypersensitive-induced response protein-like protein 2 from Oryza sativa with 86.89% of identity |
|---|---|
| Blastx | Hypersensitive-induced response protein 3 from Arabidopsis with 57.8% of identity |
| Eggnog | Band 7 protein(COG0330) |
| Kegg | Link to kegg annotations (4346849) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427696.1) |
| Pfam | SPFH domain / Band 7 family (PF01145.24) |
| Rfam | - |
| GO | - |