Ll_transcript_371737

• Id Trinity: TRINITY_DN47082_c1_g2_i5
• Name Transcript: Ll_transcript_371737
• Sequence: AAATAAACGGATAATGTGGCTTTTCAGTATCCATTACTAGCTAAAGTTTTTCCCTTCTTCTCTCCTCTCTCACCAAGTTTCTAACTTCTAACTTTGCTGT GGTTGGTTTTATCCGAGTCTTCCAGAGAGAGAAACAGAAAACATGCTTCGGAGAGATCTAGAAAGTGGTGTTGAAACAAAGGACAACAGAGCACTGAACA ACAGCAATTTCAACAATTACTCTGCTGCTCCTAACTCTTATGTTTATGATCCAGAAACCCATTGGACTTCATGGCTTGTACCTGTGTTTGTGTTGGCAAA TGTTGTTGTTTTCATTGTTGCTATGTACATCAATAATTGTCCCACCAAAAATCAAGGTGATTGTGTGGCCAAGTTTCTGCATAGGTTCTCCTTTCAGCCT CTGTCTGAGAATCCATTGTTTGGACCCTCTTCCTTAACATTAACAAAGATGGGAGCCCTTAAGTGGGATAGTGTTGTGAATCATCGTCAGGGATGGAGAC TTATTACTTGCATTTGGTTACATGCCGGACTTATTCACTTAGCTGCAAACATGTTTAGTCTGATCTTCATCGGCATTCGCCTTGAACAGCAATTTGGATT TGTGAGAATAGGCATCATCTACCTTTTGTCTGGATTTGGTGGCAGTGTGTTGTCTTCTCTATTTATTAGAAACAACATATCTGTTGGTGCTTCTGGTGCG CTTTTCGGACTTCTTGGAGCAATGCTTTCTGAACTGATCACAAATTGGACTATTTATTCCAACAAGGCAGCGGCTTTGCTCACACTCTTGGTTATTGTTG TCATCAACTTGGCCATTGGGATATTGCCACATATTGATAATTTTGCTCATATCGGGGGATTCCTAACAGGACTTCTTCTTGGTTTTATTTTGTTAGCCCG TCCTCAATATGGGTGGTTAGAGCAGCGGCATCTTCCTGCTGGTGTTCGGCGGAAGTCTAAGTTCAAGGCTTACCAATACACACTATGGATTGTCTCTCTT GTTCTATTGGTTGCTGGGTTAGTGATTGCTTCTGTGATGCTATTCCGGGGTGAGAATGGTTATGATCACTGTCATTGGTGTCACTACCTATCGTGTGTTC CAACTTCTAAATGGAAATGTGATGACAGTTAAACAAAAAGGCATGAGCTATTCATGTTCCATGTAAACTATAGCTGTTACAAACTAGGTTGTTATATTAC TTTTTTTCTTTGCTAAGTTTTTAAAAAAAAAACAGATATTGGTTTGTCTTTGTGGATTTATGTGTATATGTATGTTTTCTTTCATATATATATAAAGAAA TATTGAAATCACTGGTTTTCCTTGATATACCATGTAAACCTGCTTAGTCCATATTGTAATAAGTTCTGAAAGCATTGCCAAGTCCAAAAGCAGTACAAGA AATGTCTAAAAAATAGAGCAGAAAGCAACAACTAAAAAGGGTGGTCCAATCTAGGAGGTTCCACTTAGTGGGATATGTGGAGAGTACAGATATAGACTTA TACATAACTTAGCAATCGAATGTTGAGAGTAATATTTATCCATGGGATAGGCAGTGTAAAAATTTATAGATAGTCAGTGCATTATACACCATTCATTTGG ATTACTTTTGTTGAAAAGTCAAGAATGATTGAAATAAAG
• Tissue: pods
• Gene name: LI_gene_149622;
• Additional information: details;

Expression of Ll_transcript_371737

FPKM

• PAB: 168.7
• PNAB: 13.9
• PS1: 31.1
• PS2: 45.5
• PS3: 60.7
• PW1: 35.1
• PW2: 94.8
• PW3: 139.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371737

• Blastp: RHOMBOID-like protein 3 from Arabidopsis with 72.97% of identity
• Blastx: RHOMBOID-like protein 3 from Arabidopsis with 72.97% of identity
• Eggnog: rhomboid family(COG0705)
• Kegg: Link to kegg annotations (AT5G07250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449627.1)
• Pfam: Rhomboid family (PF01694.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;