Ll_transcript_371109

Id TrinityTRINITY_DN47083_c2_g3_i3
Name TranscriptLl_transcript_371109
SequenceTGATAACAGTGTTAAGCACAAACAACCTATCTATATGTCTGTTTTATCCATACCATTTTCCACTCTCTTATTATCCACTACAACAACCATTTTTCCTCTT CAATCTTCAACCCTTTGAACTAAAGTTATGAACTTTTACCTTTTCACACTCTCATGAGTTTCTTTTGATTGGGTTTCATGTTCATGGAGGTCATTCCTGA AGTTGGTTTTATGCACCATCACAATCACTATCGTTGGAATATTACCCCTTTCTTCTCTTACCCTTTTATGCTTCCTCCAATTAGGTCTCTGTCACTGCAC ATATGCCATCATGTACCAGTATGCGGTGTATTCAGAATCACATACTGTACGGAGAACCATAAACCAGTGGGAAGATTAGGTGCCTTGTCAACACAGAAAG GCAAGCCAACTGGTAGTGTTGATGAATTATGCAAGATTATTTGGACCGTGGAAGCTGATTTAGATGATGGTCACCTTCTGTACATAACTGGCGATCCTGC TGTATTAGGCTGCTGGAAACCAAACATGGCTGTGCTAATGTCACCTACGGAGCATGCTAACATATGGAAAGCTGAGTTTCAGATTGCCTCTGGTTTGAAC TTTAGATATAATTATTTCATCAAAGGAAAATCAAGGTCCTCAAGTGACATTGTTTGGAAGCCTGGACCAGTGTTTTCCCTGTCAGTACCTCTTACAGCCC TTGAAGACAATAAAATTGTGGTGAGGGATTTATGGATTAGGTCTGAAGCTCACGCATGGTGCTCTTGCACCGAGGAAACATATCTTCTAGAGCTACCCTC TATATCTTTCCCAGTCAAAGATGAAGGAAGGATTGCAAATCTCGTTGAAACTGACGTACTAAAGTCAGAGACACCATGTTTGGAAGATCAATTATTCTAT GACAATGAGGGCACGGTGATTGCGAATGATAAGGATTCACATTCTACTAATACTCTTTCTGAGTATTACCAGCCCGTTGAGGAACCATGGCTACTCCACT CTTCCCCTTCCATTGTCTCTAAGGATAAAATGGAATCCAATGAAATTGATGACACTGAAAAAGAGCCGGTGAAGCTGGAAGATACCGAAAAGTTGTTGCC TGAAGAAAGTAGTAGCATAATTCCAAAAGACCCTGTTTCTACCATTATTCTTATAAACTCATCTATATGTACCATGCAAAGAATTGCAGTACTGGAGGAT GAAAAATTGGTTGAATTATTATTGGAACCAGTCAAGAGTAATGTGCAGTGCGATAGTGTATATGTCGGGGTTGTCACAAAGCTTGTTCCCCAAATGGGCG GGGCTTTTGTTAATATTGGGAATTCTAGACCTGCTCTTATGGACATTAAGCAAAACAGGGACCCATTTATTTTCCCTCCATTTCGTCAGAAAACAAAGAA AGAAGAAAATGAACTCAAGGGCAAAAGTGATCATCACAATTCTGAGGACGATTGTTTAAAATCTGTACACAATGACTATGATGAGCATGAAGGAGATGAT GATTTGTATATTTCAGAAGTTCTTAAGGAAAATGTGAATGGTAGCATAGTTGATGATGATGTAGAAGCTGACTTTGAGGATGATATAGAAGGAGAAACTG ATAGCAGTTCTCTTCCTTTTGGCATGAATGGTTCTGTCAACTCTCATATTTTGCAAATGAAAGATAAGAAGAGAGCAACCCACATGGCATCCGGAGAAAA CAATTGGGTCCAAGTTCGCAAGGGGACGAAAATAATTGTCCAAGTTGTTAAAGAGGGCCTTGGTACTAAGGGTCCCACTCTGACTGCTTATCCTAAACTA AGAAGTAGATTCTGGGTTTTGATTGCACGTTGTGAAAAAATTGGAGTCTCTAAAAAGATTTCGGGTCTTGAGCGTACAAGGTTGAAAGTTATAGCAAAGA CATTGCAGCCAGAGGGTTTTGGCCTCACTGTAAGAACCGTTGCTGCCGGTCATTCTTTAGAGGAACTGCAGAAAGACTTGGATGGTTTGCTTTCAACATG GAAAAATATAATGGAACATGCAAAGTCTGCAGCTCTTGCTGCTGATGAAGGTGTGGAAGGAGCTGTTCCTGTTATTTTGCACAGGGCAATGGCTCAAACT CTCTCAGTGGTGCAGGATTATTTCAATGATAATGTTAAGAAAATGGTGGTTGATTCCCCAAGGACATTTCACGAGGTGACAAATTACCTTCAGGAAATTG CTCCTGATCTTTGTGACCGAGTTGAGCTATATGGTAAAAAGGTTCCCCTTTTTGATGAATTCAACATTGAAGGAGAGCTTGACAATATCCTCAGCAAAAG GGTTCCGCTTGCTAATGGAGGTTCCTTAATCATTGAACAAACTGAGGCATTAGTTTCTATTGATGTAAATGGCGGACATGGGATGCTTGGTCAGGGAAAT TCACAGCAGAAAGCTATTCTAGATGTCAATCTTGCAGCTGCAAACCAAATTGCAAGGGAGTTGCGAGTACGGGATATTGGTGGCATTATTGTGGTAGATT TCATTGATATGGCAGATGAAGTAAATAAAAGATTGGTATATGAAGAAGTCAAGAAAGCTGTTGAGAGAGACAGATCCATGGTGAAAGTCTCTGAATTGTC GAGGCATGGACTCATGGAAATAACACGGAAGAGAGTTCGACCAAGCGTGACATTCATGATTAGTGAACCATGTGCTTGTTGCCATGCCACAGGCAGGGTT GAAGCTTTAGAGACATCCTTCTTCAAAATTGAACAGCAAATCTGCCGGTCTCTTGCAACGATGGACCGTAAGGCAGACCCTGAAAACCCCAAGTCCTGGC CAAAGTTTATTTTGCGGGTTGACCATCAAATGTGTGAGTATTTGACTTCCGGGAAAAAGACAAGACTTGCAACATTAAGCAGTTCTCTCAAAGCCTGGAT TCTCATAAAGGTTGCTAGAGGATTCACAAGAGGAGATTTTGAGGTCAAACCATTTACAGATGAAAGAGCAGAAAAAAACCAGCATCAAGTTACTATCTCA ATCCTAAAATCCTCAGAAGCCAGAACCCGAAAGCCTGGCCGAAAGCTGACTCTTGTCCCTTCAAAAAAATCAAAGGCCAAGGGAAAATAAGTAGTTCTTT CTTGAAATAGGATTTTGTCCCTTTTTGCACACATGAATTTTGTTTATGTCATACATCAAAGATGGCATAGGGAGAAAAACTATGGCAGCTAGGGAGAAGA GCAAAAAAACATGTTTCACTTTTGAGAGTTCATGTTCCAAACATGCTGTTATAGTTGCAGCTTTTAGGCGGATAAATACCACCCAAAACTTTTCATATTG AGCAGTTTTGTTGTAAAGGATACTTTTTATCAAGTGATTACAAGTAGCAGTTTTCATGACATTATTTGAGGCCCTATCATCAAAAGGAACATATATAACA ATGTCCCTGAAAGGAAGAAAAGGAGAAACTAGTGTACTAAGCATTCCCTTAATGGAAGATTGTCTTTCAGTCAGAACTGAGGGAAAGAAAAGTGCTTTAA GAATAATGTATGTGCAATGGCATAGCAGATTCATCCGGGTGTCAATTCAATGTTGTTGTATTTATTTTTATAAATGTATGACTTTGAAAAACTAGAGTTA CTCAATTTATTGTTATTTACACATCACTTTTAGAATAGTACTCTTTAAATTCCTTAAATATATTATGGTCTGCAATACTATTTTCTTGTATTAATGTTCA AATAGCTGTAACAATTTATACTAGTTGTTGATGCATCACAAAGTTGATGGCCG BLAST
Tissuepods
Gene nameLI_gene_149627; 
Additional informationdetails; 

Expression of Ll_transcript_371109

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_371109
BlastpRibonuclease E/G-like protein, chloroplastic from Arabidopsis with 55.98% of identity
BlastxRibonuclease E/G-like protein, chloroplastic from Arabidopsis with 56.75% of identity
Eggnogribonuclease(COG1530)
KeggLink to kegg annotations (AT2G04270)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431595.1)
PfamStarch binding domain (PF00686.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;