Ll_transcript_371122

• Id Trinity: TRINITY_DN47083_c2_g3_i5
• Name Transcript: Ll_transcript_371122
• Sequence: TGATAACAGTGTTAAGCACAAACAACCTATCTATATGTCTGTTTTATCCATACCATTTTCCACTCTCTTATTATCCACTACAACAACCATTTTTCCTCTT CAATCTTCAACCCTTTGAACTAAAGTTATGAACTTTTACCTTTTCACACTCTCATGAGTTTCTTTTGATTGGGTTTCATGTTCATGGAGGTCATTCCTGA AGTTGGTTTTATGCACCATCACAATCACTATCGTTGGAATATTACCCCTTTCTTCTCTTACCCTTTTATGCTTCCTCCAATTAGGTCTCTGTCACTGCAC ATATGCCATCATGTACCAGTATGCGGTGTATTCAGAATCACATACTGTACGGAGAACCATAAACCAGTGGGAAGATTAGGTGCCTTGTCAACACAGAAAG GCAAGCCAACTGGTAGTGTTGATGAATTATGCAAGATTATTTGGACCGTGGAAGCTGATTTAGATGATGGTCACCTTCTGTACATAACTGGCGATCCTGC TGTATTAGGCTGCTGGAAACCAAACATGGCTGTGCTAATGTCACCTACGGAGCATGCTAACATATGGAAAGCTGAGTTTCAGATTGCCTCTGGTTTGAAC TTTAGATATAATTATTTCATCAAAGGAAAATCAAGGTCCTCAAGTGACATTGTTTGGAAGCCTGGACCAGTGTTTTCCCTGTCAGTACCTCTTACAGCCC TTGAAGACAATAAAATTGTGGTGAGGGATTTATGGATTAGGTCTGAAGCTCACGCATGGTGCTCTTGCACCGAGGAAACATATCTTCTAGAGCTACCCTC TATATCTTTCCCAGTCAAAGTGGTTTGACAGATGAAGGAAGGATTGCAAATCTCGTTGAAACTGACGTACTAAAGTCAGAGACACCATGTTTGGAAGATC AATTATTCTATGACAATGAGGGCACGGTGATTGCGAATGATAAGGATTCACATTCTACTAATACTCTTTCTGAGTATTACCAGCCCGTTGAGGAACCATG GCTACTCCACTCTTCCCCTTCCATTGTCTCTAAGGATAAAATGGAATCCAATGAAATTGATGACACTGAAAAAGAGCCGGTGAAGCTGGAAGATACCGAA AAGTTGTTGCCTGAAGAAAGTAGTAGCATAATTCCAAAAGACCCTGTTTCTACCATTATTCTTATAAACTCATCTATATGTACCATGCAAAGAATTGCAG TACTGGAGGATGAAAAATTGGTTGAATTATTATTGGAACCAGTCAAGAGTAATGTGCAGTGCGATAGTGTATATGTCGGGGTTGTCACAAAGCTTGTTCC CCAAATGGGCGGGGCTTTTGTTAATATTGGGAATTCTAGACCTGCTCTTATGGACATTAAGCAAAACAGGGACCCATTTATTTTCCCTCCATTTCGTCAG AAAACAAAGAAAGAAGAAAATGAACTCAAGGGCAAAAGTGATCATCACAATTCTGAGGACGATTGTTTAAAATCTGTACACAATGACTATGATGAGCATG AAGGAGATGATGATTTGTATATTTCAGAAGTTCTTAAGGAAAATGTGAATGGTAGCATAGTTGATGATGATGTAGAAGCTGACTTTGAGGATGATATAGA AGGAGAAACTGATAGCAGTTCTCTTCCTTTTGGCATGAATGGTTCTGTCAACTCTCATATTTTGCAAATGAAAGATAAGAAGAGAGCAACCCACATGGCA TCCGGAGAAAACAATTGGGTCCAAGTTCGCAAGGGGACGAAAATAATTGTCCAAGTTGTTAAAGAGGGCCTTGGTACTAAGGGTCCCACTCTGACTGCTT ATCCTAAACTAAGAAGTAGATTCTGGGTTTTGATTGCACGTTGTGAAAAAATTGGAGTCTCTAAAAAGATTTCGGGTCTTGAGCGTACAAGGTTGAAAGT TATAGCAAAGACATTGCAGCCAGAGGGTTTTGGCCTCACTGTAAGAACCGTTGCTGCCGGTCATTCTTTAGAGGAACTGCAGAAAGACTTGGATGGTTTG CTTTCAACATGGAAAAATATAATGGAACATGCAAAGTCTGCAGCTCTTGCTGCTGATGAAGGTGTGGAAGGAGCTGTTCCTGTTATTTTGCACAGGGCAA TGGCTCAAACTCTCTCAGTGGTGCAGGATTATTTCAATGATAATGTTAAGAAAATGGTGGTTGATTCCCCAAGGACATTTCACGAGGTGACAAATTACCT TCAGGAAATTGCTCCTGATCTTTGTGACCGAGTTGAGCTATATGGTAAAAAGGTTCCCCTTTTTGATGAATTCAACATTGAAGGAGAGCTTGACAATATC CTCAGCAAAAGGGTTCCGCTTGCTAATGGAGGTTCCTTAATCATTGAACAAACTGAGGCATTAGTTTCTATTGATGTAAATGGCGGACATGGGATGCTTG GTCAGGGAAATTCACAGCAGAAAGCTATTCTAGATGTCAATCTTGCAGCTGCAAACCAAATTGCAAGGGAGTTGCGAGTACGGGATATTGGTGGCATTAT TGTGGTAGATTTCATTGATATGGCAGATGAAGTAAATAAAAGATTGGTATATGAAGAAGTCAAGAAAGCTGTTGAGAGAGACAGATCCATGGTGAAAGTC TCTGAATTGTCGAGGCATGGACTCATGGAAATAACACGGAAGAGAGTTCGACCAAGCGTGACATTCATGATTAGTGAACCATGTGCTTGTTGCCATGCCA CAGGCAGGGTTGAAGCTTTAGAGACATCCTTCTTCAAAATTGAACAGCAAATCTGCCGGTCTCTTGCAACGATGGACCGTAAGGCAGACCCTGAAAACCC CAAGTCCTGGCCAAAGTTTATTTTGCGGGTTGACCATCAAATGTGTGAGTATTTGACTTCCGGGAAAAAGACAAGACTTGCAACATTAAGCAGTTCTCTC AAAGCCTGGATTCTCATAAAGGTTGCTAGAGGATTCACAAGAGGAGATTTTGAGGTCAAACCATTTACAGATGAAAGAGCAGAAAAAAACCAGCATCAAG TTACTATCTCAATCCTAAAATCCTCAGAAGCCAGAACCCGAAAGCCTGGCCGAAAGCTGACTCTTGTCCCTTCAAAAAAATCAAAGGCCAAGGGAAAATA AGTAGTTCTTTCTTGAAATAGGATTTTGTCCCTTTTTGCACACATGAATTTTGTTTATGTCATACATCAAAGATGGCATAGGGAGAAAAACTATGGCAGC TAGGGAGAAGAGCAAAAAAACATGTTTCACTTTTGAGAGTTCATGTTCCAAACATGCTGTTATAGTTGCAGCTTTTAGGCGGATAAATACCACCCAAAAC TTTTCATATTGAGCAGTTTTGTTGTAAAGGATACTTTTTATCAAGTGATTACAAGTAGCAGTTTTCATGACATTATTTGAGGCCCTATCATCAAAAGGAA CATATATAACAATGTCCCTGAAAGGAAGAAAAGGAGAAACTAGTGTACTAAGCATTCCCTTAATGGAAGATTGTCTTTCAGTCAGAACTGAGGGAAAGAA AAGTGCTTTAAGAATAATGTATGTGCAATGGCATAGCAGATTCATCCGGGTGTCAATTCAATGTTGTTGTATTTATTTTTATAAATGTATGACTTTGAAA AACTAGAGTTACTCAATTTATTGTTATTTACACATCACTTTTAGAATAGTACTCTTTAAATTCCTTAAATATATTATGGTCTGCAATACTATTTTCTTGT ATTAATGTTCAAATAGCTGTAACAATTTATACTAGTTGTTGATGCATCACAAAGTTGATGGCCG
• Tissue: pods
• Gene name: LI_gene_149627;
• Additional information: details;

Expression of Ll_transcript_371122

FPKM

• PAB: 0
• PNAB: 1.9
• PS1: 0.8
• PS2: 1.1
• PS3: 1.2
• PW1: 1
• PW2: 1.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371122

• Blastp: Ribonuclease E/G-like protein, chloroplastic from Arabidopsis with 63.26% of identity
• Blastx: Ribonuclease E/G-like protein, chloroplastic from Arabidopsis with 63.26% of identity
• Eggnog: ribonuclease(COG1530)
• Kegg: Link to kegg annotations (AT2G04270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431601.1)
• Pfam: Ribonuclease E/G family (PF10150.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;