Ll_transcript_371127

• Id Trinity: TRINITY_DN47083_c2_g3_i6
• Name Transcript: Ll_transcript_371127
• Sequence: TGATAACAGTGTTAAGCACAAACAACCTATCTATATGTCTGTTTTATCCATACCATTTTCCACTCTCTTATTATCCACTACAACAACCATTTTTCCTCTT CAATCTTCAACCCTTTGAACTAAAGTTATGAACTTTTACCTTTTCACACTCTCATGAGTTTCTTTTGATTGGGTTTCATGTTCATGGAGGTCATTCCTGA AGTTGGTTTTATGCACCATCACAATCACTATCGTTGGAATATTACCCCTTTCTTCTCTTACCCTTTTATGCTTCCTCCAATTAGGTCTCTGTCACTGCAC ATATGCCATCATGTACCAGTATGCGGTGTATTCAGAATCACATACTGTACGGAGAACCATAAACCAGTGGGAAGATTAGGTGCCTTGTCAACACAGAAAG GCAAGCCAACTGGTAGTGTTGATGAATTATGCAAGATTATTTGGACCGTGGAAGCTGATTTAGATGATGGTCACCTTCTGTACATAACTGGCGATCCTGC TGTATTAGGCTGCTGGAAACCAAACATGGCTGTGCTAATGTCACCTACGGAGCATGCTAACATATGGAAAGCTGAGTTTCAGATTGCCTCTGGTTTGAAC TTTAGATATAATTATTTCATCAAAGGAAAATCAAGGTCCTCAAGTGACATTGTTTGGAAGCCTGGACCAGTGTTTTCCCTGTCAGTACCTCTTACAGCCC TTGAAGACAATAAAATTGTGGTGAGGGATTTATGGATTAGGTCTGAAGCTCACGCATGGTGCTCTTGCACCGAGGAAACATATCTTCTAGAGCTACCCTC TATATCTTTCCCAGTCAAAGATGAAGGAAGGATTGCAAATCTCGTTGAAACTGACGTACTAAAGTCAGAGACACCATGTTTGGAAGATCAATTATTCTAT GACAATGAGGGCACGGTGATTGCGAATGATAAGGATTCACATTCTACTAATACTCTTTCTGAGTATTACCAGCCCGTTGAGGAACCATGGCTACTCCACT CTTCCCCTTCCATTGTCTCTAAGGATAAAATGGAATCCAATGAAATTGATGACACTGAAAAAGAGCCGGTGAAGCTGGAAGATACCGAAAAGTTGTTGCC TGAAGAAAGTAGTAGCATAATTCCAAAAGACCCTGTTTCTACCATTATTCTTATAAACTCATCTATATGTACCATGCAAAGAATTGCAGTACTGGAGGAT GAAAAATTGGTTGAATTATTATTGGAACCAGTCAAGAGTAATGTGCAGTGCGATAGTGTATATGTCGGGGTTGTCACAAAGCTTGTTCCCCAAATGGGCG GGGCTTTTGTTAATATTGGGAATTCTAGACCTGCTCTTATGGACATTAAGCAAAACAGGGACCCATTTATTTTCCCTCCATTTCGTCAGAAAACAAAGAA AGAAGAAAATGAACTCAAGGGCAAAAGTGATCATCACAATTCTGAGGACGATTGTTTAAAATCTGTACACAATGACTATGATGAGCATGAAGGAGATGAT GATTTGTATATTTCAGAAGTTCTTAAGGAAAATGTGAATGGTAGCATAGTTGATGATGATGTAGAAGCTGACTTTGAGGATGATATAGAAGGAGAAACTG ATAGCAGTTCTCTTCCTTTTGGCATGAATGGTTCTGTCAACTCTCATATTTTGCAAATGAAAGATAAGAAGAGAGCAACCCACATGGCATCCGGAGAAAA CAATTGGGTCCAAGTTCGCAAGGGGACGAAAATAATTGTCCAAGTTGTTAAAGAGGGCCTTGGTACTAAGGGTCCCACTCTGACTGCTTATCCTAAACTA AGAAGTAGATTCTGGGTTTTGATTGCACGTTGTGAAAAAATTGGAGTCTCTAAAAAGATTTCGGGTCTTGAGCGTACAAGGTTGAAAGTTATAGCAAAGA CATTGCAGCCAGAGGGTTTTGGCCTCACTGTAAGAACCGTTGCTGCCGGTCATTCTTTAGAGGAACTGCAGAAAGACTTGGATGGTTTGCTTTCAACATG GAAAAATATAATGGAACATGCAAAGTCTGCAGCTCTTGCTGCTGATGAAGGTGTGGAAGGAGCTGTTCCTGTTATTTTGCACAGGGCAATGGCTCAAACT CTCTCAGTGGTGCAGGATTATTTCAATGATAATGTTAAGAAAATGGTGGTTGATTCCCCAAGGACATTTCACGAGGTGACAAATTACCTTCAGGAAATTG CTCCTGATCTTTGTGACCGAGTTGAGCTATATGGTAAAAAGGTTCCCCTTTTTGATGAATTCAACATTGAAGGAGAGCTTGACAATATCCTCAGCAAAAG GGTTCCGCTTGCTAATGGAGGTTCCTTAATCATTGAACAAACTGAGGCATTAGTTTCTATTGATGTAAATGGCGGACATGGGATGCTTGGTCAGGGAAAT TCACAGCAGAAAGCTATTCTAGATGTCAATCTTGCAGCTGCAAACCAAATTGCAAGGGAGTTGCGAGTACGGGATATTGGTGGCATTATTGTGGTAGATT TCATTGATATGGCAGATGAAGGTAAATAGAAGTCTTCAACTTGTTTGTGAAAATGTTTATTAAGTAATATGATTTATGGGAAGATGGTAGCCTTCAGAGT TCAGATAAACTTTTAGAATCTTTTAATATCACTAGTTTGAGTTTTAAAACCACTGACTAAAGCTTTGTACAATCCATCTTGATAGTTTTCATGCCAATAT GTTAGTATTTTTAATCAGTGACACTTCATGCAAATATAAGAGTCCATCGCATACAGTCTCCCCCTTATATATTCATAACTGTAATCTGTATCATAAATTC ATAATGTAAAATTTCTCAATGTAACCTGTATGTCATGCATGATACAATTCTTACGCTTGCAAATTAACTTTAGTTTCTCCAAAATTGTGAACTTTTCTCT TCGGAGCCTATTTTAGTTTCTTCCTTTTAAAGGAACCATTTGACCAAAAAGTTTGAGCTGTTGAAGAAAGGAACAATAGTTGTTTTATAATTCTAACAGG GTCCTTGAAGTGAAGAGGTGTTTTCCTTGAAATGTGGACAAAGCAATTGGGTTCTGATAACATGACTAAGTACCTCTTGCCCTTGAAGCGGAATACTTGA GAGCCATGAAACACACTTATGAGATGATTCTTATGCCTTTTATTTCTCTTCCTCCCCCTTCAAAATTCAACTTGCAAACAGACCGTTAGTTGTTAAAAAG GCTGATAGTAGTTTCAAAAATTATTACATCTCTCTTTAGAGGGAAAGGTAGTTAAATTGTTCAGAAGTTGTACCCACCTTTGGAATCCATTTTCTTATTT GTTTAAACAAGTCTGTCCTTTTACGCAGAAATTGATAGCGTCCATGTTCTAAGAAGTTTTAAATTGTCCACAAATTTTATTTAAAAGTGAATTATTTTTA TAGTCTTAGTCCATACTTTGTTTTAGGCATTTAGATTTCCTTGAACCAACTCTCCCACGAGCTTAGGCTATCATGTGAAGGCACATGAAATTTTTTATAT ATCTAACTCCTCATGCAAAATCTTTTTTGATTACATGATTACATCAATTAACTCTTTTTATTAGAAGATTGGGGCAACAAGGATTGAACTCTATAGCAAT TGGTCACAGCTATCTTTCTCAAAATTTTATTAAACTTGCATGACTAAATTTGGATTTCATATCATCCTAATAGCAATTGGTCACAGCTAGCGTTAGGGGC CTTAAAATTTAGAGCATAAAATTTGCACGACTAGACATCTACCTCGGGATCAGATTTCATATAATGAACCAACTCCCCCAAATATATTTAACAAGATTAA CAATTAGGCTGCACTTTTGTCAATATGGGTTGCCTTAGTTTAATGCCTCACACATGAGGGCGAAGGAATAAAAGATGTAAGAGAAAATAATCTGTGGAAA AAGAAAACTAAATAGACAGTCAGTATTTAGATAGCTTGAGTTTTGGAATCAAGTTTGTGGTTGCCCTTACAGTAAGTAAAAGAGAAGAAGCTGAGGTTGG CCTAGGACTTTGTTATGTCCAGATAAAGGGCTTTGCCTTATTTTTTTATGATAAAACTCTATGCTCACCCTTTTCCCATATTTTTACCTTATTTATAGTA AGGACTTTGAGATATGGTTTCAGTCATCTTGCCTAAATGTAAACAATTTCCTAGATGTTGTATTTTCTAATTTAAACTGACTTAATGATATTAGCTCAAG GTTGAAATTGTTCATCATTTTTTATGCCACTGTAAAATATGATGTCTCCCTTTGTATTTTTAGTCTTAG
• Tissue: pods
• Gene name: LI_gene_149627;
• Additional information: details;

Expression of Ll_transcript_371127

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371127

• Blastp: Ribonuclease E/G-like protein, chloroplastic from Arabidopsis with 51.78% of identity
• Blastx: Ribonuclease E/G-like protein, chloroplastic from Arabidopsis with 51.66% of identity
• Eggnog: ribonuclease(COG1530)
• Kegg: Link to kegg annotations (AT2G04270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431595.1)
• Pfam: Starch binding domain (PF00686.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;