Ll_transcript_371709

• Id Trinity: TRINITY_DN47085_c2_g1_i1
• Name Transcript: Ll_transcript_371709
• Sequence: CTTTTCTCATTAAGAAAGAACTTCCCATCTTTTAAAATACTTCAATACAGAAACAAAGAAACCCTAAAATCGTTATCACTGCTCTGAATTTTGTTCTTCT TCGTTGAAATCGTAAGCCCGCCCAAATATCGTAACACCTGAAATTCAATTGCCGAATTTGAAACCCTTATTGTTGTTTTTGAAAGATAGATCGTAAAACG GCGTTCGAAGATGGTAACTGGAGCGGAAATTATTTGTCAGCAAAGCATTCCGAGCATGTTAGACGTAAAGTATCACCTTTGCGTGGCGCAAGAACACAAC CTCAAGGTTGAGGTTTCACCCACCTCCCCTTCAGTCCAAATCTTTAGCCAAGCTGTGACTTCCACTGAGGTCATTAAAGATTCCGTCATAGAGACTCCTG CAACCATGTTTATCCCAAATGTTCGTTCTGGTAGCTATGCTGAAATTGGTCCAAGAGTATCTATGGAAGATGAACACATTCGGATTGATGATCTAGCTGC CCACCTTGGATTTGTGTTTCAGTGCCCAATACCAAGTGCATTTTATGCGGTTTTCGATGGACATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAGGAAT GCTATGAACTTATTTTTTGAAGATGCTAATATGTTGCAATCATATGATACTGATGCATTTTTTCTTAGAAAGTTGGAGGAATCTCATCGAAGAGCTTTTT TACGGGCTGACCATGCTTTGGCTGATGAGCAAAGTGTTAATAGTTCATGTGGGACTACAGCATTGACGGCCCTTGTACTTGGAAGGCATTTGCTGGTTGC TAATGCCGGTGACTGTCGAGCAGTACTTTGCAGGAGAGGTACAGCTGTTGAGATGTCTCATGACCATAGGCCAAGCTATTTACCGGAACGGAGGAGAGTG GAGGAGTTAGGTGGCTTTGTTGATGATGGATACCTCAATGGTTATCTTTCAGTGACTCGTGCACTTGGGGATTGGGACTTGAAATTTCCACTTGGTAATG CATCCCCTCTTATCGCTGATCCAGACCTTCAACTGGTGACATTAACTGAGGATGATGAGTTCATGATCATTGCATGTGATGGGATTTGGGATGTTATGTC TAGCCAAGTTGCAATTAGTCTTGTTCGTCGTGGATTAAGAAGGCATGATGACCCAGAGAAATGTGCCAGAGAGCTTGTAAAGGAAGCATTGCGCTTGAAC ACATCGGATAATCTCACTGTGATTGTTATATGCCTGTCCACAGTTGAAAGCATAGTTGAAACTTGTCCGCCACACAGACGAAGATTTAAAGCTTGCAGTC TTTCGGAAGAAGCCCGTAATAGATTGAAGAGCATGATAGAGGGTAATTAATGTAAAAATGCAACTGGTGTGTGTGATGTTTTCTTTAGAGGGTTAATCTG TATTGTAGGGTGTAGGCTGTTTCAGAGAGTTAGAAAGGGCAGCCAGCAGTTTTGTTGGGATACTGGTGAGGTGAGGGGTAGTGTTTAGACCTATTTAACT GAGAGGGTGTTATTTTAGGATTATGTAGAGAGAGACTAATGTAACTAAATTTTGGCGGAGTAGATCAAGTCCCCTCCATGGTGGTTTCCATTTCATATTG TTGCTTCTGTAAATAAGAAATTGAGTTTGACTTGTCAGCAATGCTTTAAAGTTGCATCCGTGCATGCAACCTGCATCTTCAATATAGGATAGTTGAGACC TGGGTTGCATGTTTAAATCTTCTTCATTTGTTCTTAGTTGAACAACAACCTTGAACCTTATTTCTAATTGTTCAATTGCCAAACTTCATTATATTTTGTC TTTTTGAGTTGAGGGTAGTGGAACCTGTGAGTTGTGTCATGGTGTGTGAGGCTGTTATTTTGTTCTCTGCTATTGCCTGCCTCTTATATAGAGTTTGCTA CTTATTACACGTTGAAGTTTAAAAACTGTGAGACTATTCAATTTGAAAAATAACTTTGCT
• Tissue: pods
• Gene name: LI_gene_149638;
• Additional information: details;

Expression of Ll_transcript_371709

FPKM

• PAB: 11
• PNAB: 4.4
• PS1: 6.7
• PS2: 7.3
• PS3: 5.2
• PW1: 6.2
• PW2: 7.5
• PW3: 6.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371709

• Blastp: Probable protein phosphatase 2C 13 from Arabidopsis with 56.85% of identity
• Blastx: Probable protein phosphatase 2C 13 from Arabidopsis with 56.85% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT1G48040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431168.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;