Ll_transcript_371714

• Id Trinity: TRINITY_DN47085_c2_g1_i2
• Name Transcript: Ll_transcript_371714
• Sequence: CTTTTCTCATTAAGAAAGAACTTCCCATCTTTTAAAATACTTCAATACAGAAACAAAGAAACCCTAAAATCGTTATCACTGCTCTGAATTTTGTTCTTCT TCGTTGAAATCGTAAGCCCGCCCAAATATCGTAACACCTGAAATTCAATTGCCGAATTTGAAACCCTTATTGTTGTTTTTGAAAGATAGATCGTAAAACG GCGTTCGAAGATGGTAACTGGAGCGGAAATTATTTGTCAGCAAAGCATTCCGAGCATGTTAGACGTAAAGTATCACCTTTGCGTGGCGCAAGAACACAAC CTCAAGGTTGAGGTTTCACCCACCTCCCCTTCAGTCCAAATCTTTAGCCAAGTTCGGGTTTCCTCTGAATCCCTTTCTACTGAAACTTCTTCCTATGAAT CGCTATGTTTATTTTCTATTGTTTCTCTCTTTTTTTGTTTCTATTTCAATTCGGCTTCATTTTGTATTTATTTTTCGATTTGGTTAGAGAATCGGTTTTT CCTTTATCCTTTTAGGTTATTTTTTGGGACCTAATCGGTGGATTTTTTTTGGGGGTGGCGGTGATTCTTATATTTCAATCAACTGGGGTTTAGTGGATTG TTAGGTTCATTGTGGAATATGAATCAGGGGTTAAATTTAATGTTTTTCTTCTATTGATTGATAATTGTGTGGAAGATCTAATGATCTTGTATTTGTGTTT GCTGCGATAGCTTAACCTGGATTTTTTAACTGGAATTTGGAAAAAAAAGTAAGTTTGTATGCGTAGTGAATGCAATAGAGAGAAGGTTGAGGTAACAACT TGTGGAATAAATGTTAATCTCACCTTATGTGATTCGGGCATGTGTGAAGAATATTGGGTAGCTCGTGGGGATGTAGAATAACTATAGGCAATAAATCATT AAGAAGAATTTAGATCCGAATATTTATTTAGGATAAGACATTGTCATGTTGTTTGATCCATGTCCATATAACCAATTCCATGGTGGAAAAGGCATGGTTG TTGGTTTTGTTTATTTAGCCCAGGGTCTTGATACTATTAAGAGGAATTTCGGTTGTAATTTGGAATTGGGCCTCTGTTTCTTCTGTTTTTCATCTACTGG ATTGGATTGCCTTTGTATTGATGCGCTGACTGATGTTTTATATGGATATTAGGCTGTGACTTCCACTGAGGTCATTAAAGATTCCGTCATAGAGACTCCT GCAACCATGTTTATCCCAAATGTTCGTTCTGGTAGCTATGCTGAAATTGGTCCAAGAGTATCTATGGAAGATGAACACATTCGGATTGATGATCTAGCTG CCCACCTTGGATTTGTGTTTCAGTGCCCAATACCAAGTGCATTTTATGCGGTTTTCGATGGACATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAGGAA TGCTATGAACTTATTTTTTGAAGATGCTAATATGTTGCAATCATATGATACTGATGCATTTTTTCTTAGAAAGTTGGAGGAATCTCATCGAAGAGCTTTT TTACGGGCTGACCATGCTTTGGCTGATGAGCAAAGTGTTAATAGTTCATGTGGGACTACAGCATTGACGGCCCTTGTACTTGGAAGGCATTTGCTGGTTG CTAATGCCGGTGACTGTCGAGCAGTACTTTGCAGGAGAGGTACAGCTGTTGAGATGTCTCATGACCATAGGCCAAGCTATTTACCGGAACGGAGGAGAGT GGAGGAGTTAGGTGGCTTTGTTGATGATGGATACCTCAATGGTTATCTTTCAGTGACTCGTGCACTTGGGGATTGGGACTTGAAATTTCCACTTGGTAAT GCATCCCCTCTTATCGCTGATCCAGACCTTCAACTGGTGACATTAACTGAGGATGATGAGTTCATGATCATTGCATGTGATGGGATTTGGGATGTTATGT CTAGCCAAGTTGCAATTAGTCTTGTTCGTCGTGGATTAAGAAGGCATGATGACCCAGAGAAATGTGCCAGAGAGCTTGTAAAGGAAGCATTGCGCTTGAA CACATCGGATAATCTCACTGTGATTGTTATATGCCTGTCCACAGTTGAAAGCATAGTTGAAACTTGTCCGCCACACAGACGAAGATTTAAAGCTTGCAGT CTTTCGGAAGAAGCCCGTAATAGATTGAAGAGCATGATAGAGGGTAATTAATGTAAAAATGCAACTGGTGTGTGTGATGTTTTCTTTAGAGGGTTAATCT GTATTGTAGGGTGTAGGCTGTTTCAGAGAGTTAGAAAGGGCAGCCAGCAGTTTTGTTGGGATACTGGTGAGGTGAGGGGTAGTGTTTAGACCTATTTAAC TGAGAGGGTGTTATTTTAGGATTATGTAGAGAGAGACTAATGTAACTAAATTTTGGCGGAGTAGATCAAGTCCCCTCCATGGTGGTTTCCATTTCATATT GTTGCTTCTGTAAATAAGAAATTGAGTTTGACTTGTCAGCAATGCTTTAAAGTTGCATCCGTGCATGCAACCTGCATCTTCAATATAGGATAGTTGAGAC CTGGGTTGCATGTTTAAATCTTCTTCATTTGTTCTTAGTTGAACAACAACCTTGAACCTTATTTCTAATTGTTCAATTGCCAAACTTCATTATATTTTGT CTTTTTGAGTTGAGGGTAGTGGAACCTGTGAGTTGTGTCATGGTGTGTGAGGCTGTTATTTTGTTCTCTGCTATTGCCTGCCTCTTATATAGAGTTTGCT ACTTATTACACGTTGAAGTTTAAAAACTGTGAGACTATTCAATTTGAAAAATAACTTTGCT
• Tissue: pods
• Gene name: LI_gene_149638;
• Additional information: details;

Expression of Ll_transcript_371714

FPKM

• PAB: 3.8
• PNAB: 0.6
• PS1: 2.2
• PS2: 0.5
• PS3: 0.8
• PW1: 1.9
• PW2: 1.6
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371714

• Blastp: Probable protein phosphatase 2C 13 from Arabidopsis with 63.69% of identity
• Blastx: Probable protein phosphatase 2C 13 from Arabidopsis with 62.54% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT1G48040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431168.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;