| Id Trinity | TRINITY_DN47089_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_371747 |
| Sequence | TATTTACATATATTTCACTGATTCTGATTTGGATGTATTCCCCACAACTGAGTTGCGATGATGATATATCAGTTTATTGATTGTTTGGTGATATTTCGGC AGTAATGTCGAACCTGAGCGGTTAACTGAGCAACTATGCACATTTTCATGTATTTTGTTTCTTGTTCTTTGCTGAGATTGTTTAGTTTATATGACTTTTT CTTGAATTTTCCCTGTACAGAATTATTGTTCTTTCTGAGCCTGCTACTCCGGTGTTATTTACATATATTACACTGATTCTGATTTGGATGCGTTCCCCCA ATTAAGTTGCTATGATGAGATATCAGTTTATTGATTATTTGATGATATTTCGGCATTCATGTCGAACCTGAGCGGTTAACTGAGCAACTCTGCACATTTT CATGTATTTTGTTTCCTTTTCATTTGCTTGATTTAATTGTTTAGTTTATAAGGCCTTTTTCTTGAGTTTTCCCTGCACAAATATATTGTTCTTTCTGAGT TGTTCTTCCTGTGTTATTTACATATATTTCACCGATTCTGTTTTGGATAAATTTCCCCCAATTGAGTTGCAATGATGACATATCAGTTTATTGATTGTTT GATGATATTTCGGCAGTCATGTCGAACCTGAGCGGTTAACTTCGCAACTCCACATGTTTTAATTTATTTTGTTTGCTTTTCATTTGCTCGGATGAGATTG TTTTTAGTTTTAAGGCCTTTTCTTTTTCTTGAGTTTTTCATTTACGTAAATATTGTTCTTCCTGTGTCATTTACTTGTATAGTTTACCAAAATTTACCAG ACTTTTATTGAAAACTGACTAAAGCATTGATGATGTCTTTTGTATTTTATTTAATTTAAGTAACCATCACATTATCACTGTTGGCTATCCAGATGATTTT ATTGTTTTAACTTTCTCTTGATTTTTTTATGGTCTACTACCCTTGTTGTCATAATTGATTACTAAAGGTTGAATTCTCCTTTAAATTTTTTGCCATGATT AGTCTGTCCTATTATGCTTAATATTAGCTATTAACATTGCTATGACATCATCATCGAGTTATTACCAGAGCAACCAAGTTCAAGTATCCATTTATAAGTA TGTATTTTCTACTTTGCTGTTCTGTTTTTCCCTATAATTAGATTCTTTTTATTTACCAGTAGTTGTTCCGTATGGTGGATATTTTGATGCTGTGCAATGC ATCATTCCTGTCTGGCACCGGTTTCCTTTTTGTGGCTTCAGTAATTTTTCCTGCATGTTGTGCTTGAATTGCATTGGTGATTCACTTACAAATTTCCATG CTGGTTTTGCTATTTTTCTAACTTTTCCTCCTTTCCATGCTTTTACAGTTTGACGCAGACGATACTGCTTCAATTGTCTTGTATGCTGGGGGCGTTGTAG TGTCTCTATGGTTAACATCAGCTGTTATTGGTGCTATTGATTCTATCCCATTGTTTCCCAAACTGCTGGAAGCTGTAGGACTTGGATATACAATATGGTT CACTTCCCGATATCTGCTTTTCAAGAAAAATAGAGATGAGCTTACTGCCAAAATAGAGGAGCTCAAAGAACAAGTTCTTGGTTCAGATGATAATTAATTA TCCTGAAAACATGAAATTAGATTTGTGTTTTGCTTAAACTGTGAGGGAACAAATTTTCCATCAGCTCATACAGCCTACATGCTAACAGAGGCAATTGCTG TGTTTTTAGTTTCGAAGTAAAACAATCTGATTCAGCACCCACCCTTTTGGTAATCTTGGTTTATACAACATTGTTCTTTGGGGCATTCCACTCTTTCTGT TTTCTCACTGGTTGAAGATTCTTCATTAGAGTGTGTATTTTTGAAGGTACGTGCAAGCAAATATACAGTGAAACGAAGAGATATTAAACAGTGTACCGTT ACTGGAAGATTCTATTTACATATGAGATTGTCGCCAATATGTTTATGAAGATAATAGAAATGAGTTTCATAAACTTGCTGTGGTTGCTTTTACCCGGTTG TTAATTCAGTTTACTCTTCCCTGTTTCCCGTTACAATTCAGTGAAAATATGTTTAGAACTCAGAAGGAGTTATTTTCACTCATACAAGCATTAAAGTGTG AATTATCAGAAGTTTCGAACAATTGCATTACTTTTTTCCCTGACATTTACTTTTTCAAATTGATACAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_149667; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371747
| Blastp | - |
|---|---|
| Blastx | Protein CURVATURE THYLAKOID 1D, chloroplastic from Arabidopsis with 61.73% of identity |
| Eggnog | NA(ENOG4111UCM) |
| Kegg | Link to kegg annotations (AT4G38100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445406.1) |
| Pfam | - |
| Rfam | snoR128 (RF01428) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |