Ll_transcript_371292

• Id Trinity: TRINITY_DN47094_c0_g4_i1
• Name Transcript: Ll_transcript_371292
• Sequence: CAGTGCTCTTAAGCAAAGAATCGCCGCCCTTGGTCAAGACAAGATCTTCAAAGATGCTCATCAAGAAGCACTGAAGAGAGAGATAGAGAGACTAAGGCAA GTTTATCATCAACAAAATCTCAAGAACATGGAAAATGCTGCAGGGTCACCATCACCATCACCATCACCACCCATTCCAACCAAAAACAACAACAACAACA ACAATAGGAAGAAGAAGCATAAGAAATCACTCCAAAAACCATTCCCAGAAAAAGATGCATTCCCATCTTCCCTCCCTCTCCACACCAAAAACCCACGTTC CATTTACAACGACATCAAAAGATTCGCTCGTCTCAACAAGCTCAAACAAGCTCTCACCATCTTAGACTATGTTGATCAACACGGTATTCCTGTCAACCCC ACTACTTTCTCTGCACTCATTGCTGCTTGTATCAGAACTAACTCACTTCCACAAGGAAGAGAGATTCATACCCATATTCGAATCAATGGTCTCGAAAATA ATGAATTTTTAAGAACCAAACTTGTTCAAATGTACACTTCTTGCGGCTCATTGGAAGATGCTAAGAAATTGTTTGATGGGTCGGGGTGTCTTCGTGGTGG GACCGTGTATCCGTGGAATGCATTGCTTAGAGGGACTGTTGTTGCTGGGAAGAGGAATTATCTTGATGTGGTTGATACTTATTCTCAGATGAGGGAGTTG GGGGTTCAGTTCAATGTGTATAGCTTTTCTAGTGTTATTAAGGGGTTTGCGGCTGCCAAAGCCTTTTTTCAAGGGTTGAAGACACATGCCCTTTTGATTA AGAGTGGTTTTTCTGCTAATTTTATTATTAGGACTAGTTTGATTGATATGTACTTTAAGTGTGGGAAGGTTAAGCTTGCACGCCGTGTGTTTGATGAGAT TTCTGACAGAGATGTTGTCGTGTGGGGAGCTATGGTTGCGGGTTTTGTGCATAACAGGTTGGAGAGGGATGCGTTGGAGTATGTTAGGTTGATGGTGGAG GAAGGAGTGGAGGTGAATTCGGTTATAGTGATGAGTGTTCTTCCTGCCATTGGGGAAGTTTGTGCGCGCAGGTTAGGTCAGGAGGTTCATGCTTATGTAC TGAAGACGAAATCGTACTCTAGCGAAGTGCCGATTCAATCTGCTTTGATTGATATGTATTGCAAGTGTGGGGATATGAGTTCAGCAAGACGGGTTTTTTA TGGCTGCTCGGAGAGAAATGTAGTTTGTTGGACAGCTCTGATGTCAGGTTATGCTTCGAATGGTAGACTGGAGCAGGCACTGAGGTCCACAATTTGGATG CAGCAAGAAGGGTTCAGGCCTGATGTGGTGACAGTAGCTACTGTTCTTCCAATCTGTGCTAAGTTGAGGGCTCTGGATGAAGGGAAGCAGGTTCATGCTT ATGCTTTAAAACATTGGTTTCTGCCTAATGCATCATTAACTTGTTCTTTAATGGTAATGTATGCTAAGTGCGGTGTGATTGACTATGCTGAACGACTGTT TGATGGTATGGAGCATAGAAACATGATTTCATGGACAGCCATGATTGATTCGTATGTAGAAAATGGGCGCCTGTACGAAGCACTTGGCGTGATAAGGTCA ATGCAATTGTCAAGCCATAGGCCAGACCCTGTTGCCATATCAAGGATGTTGAGTGTTTGTGGTGAACTAAACCTAGTGAATCTCGGGAAGGAGATTCATG GGCAGTTTTTGAAAAGGAATTTCACATCAGTGCATTATGTTTCGGCAGAACTTATCAATATGTATGGGAAGTTTGGAGATGTTAATAAGGCGAAGTTGGT GTTCAACGCAGTTCCCGTTAGAGGTTCCATGACATGGACTGCTCTTATAAAGGCCTATGGTTATAATGAATTGTATCTAGATGCAATTGATCTTTTTGAA CATATGAGCTCAAATGGTTCTTCTCTAACCCACTTCACTTTTGAAGCCATTCTATCTATATGCGACAGAGCTGGGTTTGTTGATGATGCTTGTCGAATCT TCAATTTAATGGCGAGCTATAAAATTGAAGCAAATAAGGAACACTTAACCACAATGGTCCAACTTCTTACTCGCTATGGTCAACTAGAGAAAGCTAAGAG GTTTATGCAAATGTGTTCTTCCTTATAGAAGAGGCAACATCACTTTCCTTCTAAAATATTTATAGATTTTAAACATTGTTTAACTTTCTTTATTATGAGT ATAGGCATATAACCTTTCGCTCAGAAAACTCGTAACTCGTAACTTATTTGTAACTTTGTACCATATTAAATAGAATAATTATCAAAATTGGAAAGTTGCT TAATTCAACATATAATTGCTCACATCCTTATTTTGATGGAGTTAATTTCATATATTTGTATTTTTATACCATATTGAATAGAATAATTGTCAAAAATTGT AAAGTTGCTTAAATTCAACATATAATTGCTTATACCATTAGTTTGATGGAGTTAATTTCATATTTTAGCAGCCATAGTTCTCTACTAGATGAAACACTTG ATTTTGCTGTGTAGATGAGATAACATCCTCCATGCTGCATGGCGGATTGTGGTTGGAGTGATGTTGGGGGTAAAACAATGGCAATCGGCCGATCGTGGTT GGAGTGGTGTTGGGGGGTAACAACAATGGCGATCGGTCGATCATGGTTGGAGTGGAGTTGGGGGTAA
• Tissue: pods
• Gene name: LI_gene_149708;
• Additional information: details;

Expression of Ll_transcript_371292

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0
• PS2: 0.5
• PS3: 0.8
• PW1: 0
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371292

• Blastp: Pentatricopeptide repeat-containing protein At1g71460, chloroplastic from Arabidopsis with 58.31% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g71460, chloroplastic from Arabidopsis with 59.94% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G71460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461265.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;