Id Trinity | TRINITY_DN47095_c3_g2_i3 |
---|---|
Name Transcript | Ll_transcript_370957 |
Sequence | TATCGTTTCAACAAAATATCATTTATAGGGATTCTTTTCAACAAAGTATCTTTCACTAAATCAAACATTTAGACAACATTTGCATATAATTACATTAATT ATGTTTGTTTATATCACAATGATAAAATAATAATCACACGTTTGATGAAAGCAGTTATGGGAGTGTTCATATATCTAATTGAAATTGTTGTAATTGCAAT GACGAGTGAAGAATGAAGCATGTAGTGTATGGCAGAGAGAGTGTCCACGTGGCAAAAACATAACCTCATAGAAGAAAAAGGTAGAGTTGTTGCTTGATGT AGTAACTATGATGTCTGTCACAAACCCTCTGAATCAACAACTGTCATCTTTGCTTTCTCTCTCTTCTCTTCTCTTCTCTTCTATTTATAAATAAAGGACA CTCTCAGGTGCAAATGCAGCATCCGGAGGAGACTTGACAATTGCTGCCACTGACCCCCTATCTGAAATAGTCTATTCTCAAGATAAAGGTTTGAGTCTTA AATGTGCCGATTCATGCTTTGCTGATAAAAATAATTCTCTTTTCACGGATGTTGGGCCGAGCTGTATCGTTCTTGCCCCGCCACAAATTTTAACTGGTAT CATGCCACAGGGTGAAGGCAATGAAGAAAATGATACAGGGTCTGGTGGTAATATGGAGAAAATGAACACTGCAGAAAGAGCACTTAATGATCAGCACGAG AATCTAATGAATGATTCACGGAAGAATACTTGTGATGTAGCCAACACTGGAACTGATAAAATATTTGGCATAGAGGGTAACAATTTTTCTACTATTCCAG GTCAGGTTGACCAAATGGCATTTGGTAGTTTGTTACTTCAATCAGATGAACATAAACATAGCATGGAGCAAAATCCTTCACCAAAGAAATGTTCCAATGA AAATATGGATATTGGCAAAGGAAAAAAGGCAGTTGTTATTGACGAAGCTTTATATGCTATGTTTGAGCATCCTCTAGCAGAAACTAATTTAGCATCCTCT AGCAGAAATCCTTTGGAAAAACTGGAATCAACCGCAGAAAATGATTTACAAATTTCCAACTTTGAAGCTGTGTATGTTGCGACAAGCGGAGTTATTGTTA ATGAGATTGAAAACAAATCTCGGAACATTGAAATGATGCTACCATGTGATAAGATTCTCCCACTTTCACATTATCCATGTCATAGCAGAATTCATTTGAC AATAAATGAAGGCAAGGAAAAGTCCTTATCAGATGGAGATGCAAAGGTAAGATTGTCAGAGGAGGACAATGACAGCAATTCAAGTGTTGAAAGCTGTAAC AGCACTGGCTCTTTCTCTACAGGTAAGAAGAGACGTAACCTTTCGCAACAGTTGATAATTGGAAGCAAAAGAGTCAAAAAGCAAATTGAAGAAAATATTG GTTGCAAGTCTTATGTTAAACCGGATAGCTCTTTCATGAACTGGATTTCAAATGTGGTGAAAGGATTACCTCAATCTATGCAAGATGTTCCAAACACTTC GGCTCATGCCCTTTCAAATCCAGATCCAAATGACAGACTTATCACATGCAATACAAATCAAGATCTTGTGCCAAAAAATATAGGATTCAAATCCCTTTTT CAGTCGATATATTGTCCAAATTTAAAGAATTCAGGAACAAGAAAGTCTCATCAAGAAGGAGAGGGTTGCAAGGATATAGAGCCAGATTACATGGTACGTG GAATCGAAGCTAGTCCAATAACCTGTTGTGAAGAGAATAATAGCCTTCAAGGACGGTATTCGCAATCAAATAGATTTGAAGTTTCGGCTCAGAGATATGA AGCTGGTCCATCCTCACAGCCTATGATTAAACCTCTAGACTTTTCAAACAGTCATGAAAGTACTAAGGACAAAGAAGAAATGGGACCACGTTCATCTTCA ACTAGACAAAATACAAATAATACGGAGAATGTTGATTCAATTGCACTGTATGATAGAAGGGGAGCAGGGAATATCCATCACAAAAGTGATAATACTCTAG GGAGTCTTTGGATAACTCGATTTTCACCAAAATCCACTGCCCCCTTAATCATCTCTGACCATCTCAATGAGAAAGTTGGATCTCAAGTCCACACCACTGG TTCCTCAAAGATTCCAAATGATTCCAATAAACACATTTCTTACCTGAGAAACTGCAAGATTGCTAGAGAACAATCTGGTGATGAAATGGACGTTTCCGCC GGTCTTAAGGAAGATAAGGGAAATAGTGATCATAAACTAAAGAATAAGTTCAATCCCCTCTCATCTTCCACGGGATTCAGAAATTCAAAGCCTATGACTT CTATGTTTGCTAGGAGGTTAGGTGCCAACAAACATATTATACATAGTACCACACAAGTAAATACATTATGTTTGTTTTGTGGGACAAGAGGTCACCAACT CGGTGATTGCTCAAGTATTGAAGAAAGTGAGCTAAAAGATCTCCAAGAGAATATAAATTTGCATGGAGAACTTGAAGAACTTCCTTGTATATGCATCAAA TGTTTTCAGCCCAACCATTGGGCAATTTCGTGTCACGCCTCAACCTTGACAAGGAAACAAAAGTTGGAAGTCAATGCCTTGTTCAATTATCATATTCCTA GTGGAGAGCATATTAGTCCTAGCAATGAAAGGAGTACCAGGCTTCTAACCAGTGAGGATGACCAAATTTTATCTGGCAGTTGTAATATTGATGGAACTGA TCACAAGGAGGAGAGAAATCTAAACTTGATGCGGAAATCAAATCAAGCCATAACCTCCAAGGCAGGGTGCTATGCTTCATTCAAGAAATACTGTAGTGCA AGTTCTGAGGAAAACAAATTCAAGGAAGATCCTGGTACATCTCCATCTAAATTGGCTGAAAGACAGGTTTCACAAGTACCACAGAGAATCTCTGATGCAG TTAAAAGGCTTCGTTTGTCTCGCACTGACATCTTGAAATGGATAAACACTCATGAATCAATATCACAACTTGATGGTTTTTACTTGCGCCTGCGGCTTGG GAAGTGGGAAGAAGGACTACGAGGAACTGGATACCATGTGGCATCTATAAATGAGGCTGAGATACAGTGTTCAGAGCAAAGTACAACAAAATCTCTCTCT GTGAATGTAAGGGGGATCAAGTATATGCTCGAAAGTCGGTATATATCCAATCATGATTTTCTTGAGGAAGAAATCATGGAATGGTGGTGCACCACCACAG AAGCTGGTGCTGCTATTCCATCTGAACAAGATCTTAACAAAAGAATTGGAAAGAAAATAATGTTAGGTCTCTAGGCATTTATTATTCTAAGTGTTAATAT TATTTATTGCTAGAAGGGTGAGTATACTCTCTCTTCTGCAGATAGATGAAGTTCTGTTTTCCTCATTTTTCTTATGCAATTAATTGTATATCAATGAAAG CTTTTCAGTCATCATGATTTCGTGAATGTCACATTCAAATAAAGAGTTTATGTTATTTCAACATCAACTTTTCAGCATCATATACAATAGTATTGTTTTA TTTTATCTTTAAA BLAST |
Tissue | pods |
Gene name | LI_gene_149719; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370957
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422004.1) |
Pfam | Zinc knuckle (PF14392.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |