| Id Trinity | TRINITY_DN47106_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_310515 |
| Sequence | CAACTTTTTTGTAGCAAAAAGTTTAACTTGCAACATGTATAAACTTCAGAGTCATATTTGCACATTATCTTATACTTTAGGGTTGGATATTCACTTTGAC CTAAAAATCTAGGTAAAATGCTCTTTCCCCTGAAGACATGTGGATCAACTTTGATTTGACGAGTTATGCACTACAAAAAGACAAATAATAATTGCATACA AGTAACATCAAGGGATGGGATGAGGATAGAGCGAAGTGATTTAAGTAAGGGGACCACACCACCATATGATCCGATCTCAAACCACCGAAATGAAGAACAA TCAACACAAATTAAGACTCATGCATCTGAACTACATTATGTAATACAAAGATTTCATTTTTACTCCAACCCCATTTCTCAACAATGGACTACGAAAGGAT CCAAAAGCCTCAGGGACGTGGAGGATTTTCACCAGGAAAATTGAGGAACATGCTATTGGGTGTGGAGAAGAAGAGGAAAGAAGAGAAAGAGATTCATTCT ACTTTCACCACGAGATCTCAGAACATGGATGAATCTGGTGGCAGCAGTTCTGATCATTGTAAAGATGTAGATGTTGTGAGTGTCCTTCCTGATTGTTCAA CTTCTGCTATATCTAGCACTTTTAGTGCAGATGCAGTTGGTGGTGGTAACCACATTGTGAAGGATAATGCAACAGCGACTTCAAGGCATAGAATCTTTGA AGACCCTTCTTTGGATTGTGATAGTGGGAACGATAATATGAGCATGTCTTCACCAATGTTTGAATTTCAAAGGGCTGAGCGTGCTCCACAAAGAGTGCCC ATGGGGCCATTCTCAAAACCAGCACCGTCTAAGTGGGATGATGCACAGAAGTGGATAGCAAGTCCAACATCAAACAGACCAAAAATAGGACAGGCCGAGG GGCAAGTGGGACTACGTAAAGTTGGTGGTCTTGGTTATGGAAGCCGGCAGTCTTCTATAAAGGTTGTTGTTGAAGTTCCAGATCGAAGAGAAATTGTGTT AGATGAACCAGATACCAAGCAAATTGATACAAATCAAACTAAGATGGAAAGTGGAGTACAAAAGGTTGTGGATTGGGACAATGCCCCCGATGCAGTTGCA AAATCATATGTTAGTCTAAGCCAGCATAATTCATCCATTCCTGTCCAGAACCCCTCAACATTCGTTCCTCCCACTTCTACAGCTTGGTCTGTATCAATGA GAGACATGGGTACTGAAATGACCCCTATTGCTAGCCAGGAGCCTTCAAGAACAGGTACACCTGTGAGGGCAACGACACCAATTCGAAGCCCAAATTCTTC CCAGCCTTCCACTCCTGCAAGGGCTGCCCGAGTATCAACTTTTACTCATCCATCTAGTGACCATCCCAACAATAATGAATTGTCCGAAAAGGAGCTACAA ATGAAAACCAGGCGAGAAATAATTGCCCTTGGAGCACAACTAGGTAAGACAAACATTGCCGCATGGGCTAGCAAAGAAGAAGAGGACAAGGTTGCATCCA CTTCACTGAAAACTAAAACATCCGAACAACCTGCTAAGGGTGTCATTGAAGCACGTGCAGAAGCATGGGAGGAAGCTGAGAAAGCCAAGTATATGGCCAG GTTTAGGCGTGAGGAGATGAAAATCCAGGCTTGGGAGAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAGGAAATTTCAGGTAGATGTTGAAAGAATA AGAAGTAAGACACATGATAAGCTCATGAATAAATTAACAAGTGTAAGGCACAAGGCTGAAGAAAAGCTAGCAGCTGCAGAAGCAAATAGAAGTCATGAAG CTGCAAAAAGTGAAGAACAATCAGAGTATATAAGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTCCCTGTTGCAGTTGGTTTTCTTGAAAATA ATGCATGTCCTTGTCAATGTTCCATTTTTCCCCTATGGGTATGCAATTTCTTTTATTGGCTTAAGTATGGTGTAAAATTATACATTGATCTGCAAAATAA TTGCAATTTGGAAGATTTATGTTTTTGTTCAGTATTAACCCTTCTGAATTTCTTTTGGAGTTTGATAAATGTTACTTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_149799; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310515
| Blastp | Remorin 4.1 from Oryza sativa with 38.26% of identity |
|---|---|
| Blastx | - |
| Eggnog | Remorin, C-terminal region(ENOG410YBQG) |
| Kegg | Link to kegg annotations (4343649) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464692.1) |
| Pfam | Remorin, C-terminal region (PF03763.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |