| Id Trinity | TRINITY_DN47107_c7_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_309531 |
| Sequence | GGTGATGATGTGATGACAGTGTATAAAACTGATACACTATCAGTGCATACATCTTTCTCTCTCGAATGAATTAAAGTGGCAGTAGAGACTAGAGAATGAG CCATTTTCACAATTTCATGTTTATACTTCTTTTTCCTTTCTCTTTTATATTCTTAGTCTTGAAGGAAATATACGTCATCTGCCTCCTATGGATTAAGGTC TTGACTATTGAGTGTTTTTGGAAGATTTATTCCTCACAAGAATAACTTTCATTAAAAAAAATACTTTTGCTTTAATTTGATATGTTTTACCTCAACTAAA GAAAATTTGTTATTTTTTGTTGCTGAAAAGCAATTTCAGAACAACTAGAAGTTTGATCACATTTTCCCATATCATTTTGCCAAACTCACTATCATACTAA ATAAAAGTGAATCATCCAGTTATGGTTTATATCATTGGCATGAGTTGATTACTTTGCTCTATATTAAATTATTAACAATAGGTGGGTGATCCAAGCTCAG ACCATGATTGTTGGGAGAGGCCGGAGGACATGGACACAAGCAGGACAGCGTATGCTGTTGATGCACCAAATGCGGCTTCCGATGTCGCTGGTGAAACAGC CGCTGCACTAGCAGCCTCATCCATGGCATTCAGGTCATCCGACCCGGGCTATTCGGAGACATTGCTACGAAATGCTATTAACGCATTCCAATTTGCAGAT AGCTACAGGGGTGCTTACAGTGATAATGATAATGTTAAGTATGGGGCCTGCCCTTATTATTGTGATTTTGATGGCTATCAGGACGAGTTGCTATGGGGAG CTGCTTGGCTAAGAAGGGCTACTCAAGATGATAATTTCCTCAACTACATTCAAAGCAATGGCAAAACGCTTGGTGCAGACGACAACATCAACGAGTTTGG TTGGGACAATAAGCATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTCATAGAAGGAAACATGTACTCTTTGGAATCCTACAAGGACTCAGCACAGAGC TTCATGTGCACACTCATACCTGAATCACCAAGCTCTCACATAGAGTATACTCCTGGTGGACTTGTTTACAGACCCGGAGGCAGCAACTTACAGCATGCAA CCTCAATAGCTTTCCTTGAGTTGGTATATGCCAATTACTTAACTCACACGTCACAAGATCTCAACTGTGGCAATGTCTATGTTACTGCACAAACACTTCG CCGACATGCTAAGAAGCAAGTTGATTACATTTTGGGTGATAATCCAATGGGGTTGTCTTATATGGTTGGCTATAGCGGCTATTATCCGCAACGCATTCAT CACCGTGGATCATCTTTACCTTCCATAAAGGATAATCCTCAGTTTATTGGGTGCAAAGAAGGTTCAATGTATTACAACTCAACTAATCCCAACCCCAATG TACTTGTGGGAGCCATTGTTGGAGGACCTGGAGAAAATGATGATTATTTGGATGATCGAGTTGATTTCAGGAAGTCAGAGCCAACTACTTACATTAATGC ACCTTTTGTTGGGGTTCTAGCATATTTTGCTGCTAATCCCAACTTTACTTGATACAGGTACAGATAGTTTTTAAGTTATTTTTTTGTAAATAAAATCATA TAGGCGAAGATTTTAAGCAAGTGGGAAGAGTCTTGTAGGACCTTGATGCACATTTTGAGAATTTCAGGATTAAAGTCCAAGAAAGCTTCATGCACTTTTC CTTATTTATACCATCCCAACAAAAAAATTCAATGTTATCACCAAAAAAAATTGTTCCATGTACATCATGTCTCACATTTCTCGTATTAAAATATAAATAT GTATAATAAAATGGGGTGAAATCAACTGCAATTAAATCATAAAAACTATATTGTTGAATGAAAGGTGAGTACTAAATATGTATGTAGAGTTTCACCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_149816; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309531
| Blastp | Endoglucanase 24 from Arabidopsis with 73.29% of identity |
|---|---|
| Blastx | Endoglucanase 24 from Arabidopsis with 73.65% of identity |
| Eggnog | endo-glucanase(ENOG410YC2H) |
| Kegg | Link to kegg annotations (AT4G39010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451001.1) |
| Pfam | Glycosyl hydrolase family 9 (PF00759.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |