| Id Trinity | TRINITY_DN47107_c7_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_309537 |
| Sequence | AAACCAATGAGAGAACTACATTTTATAATTTTTTGTTTTTCAATTTTTTCTTTTATCCACATGTAAATATGTGATTGACATGAAACATGGTATGAGACAC TGTCGAGGACATGTGATCCCCATCCTATAACCCTATAGGGCTATAACCACTCACTTGCTCTCTCTTTCTTCCTTTTTGCACATTCATTCACTCTATAATT CCGTGTTCTAAATAAAACACACTAATCACACTATCACAGTGACACATAAACCAAAATGAAGCTATCCAAATTGCACCATCTTCCAATGCTTCTGATATTC CTTATTGGTTTTGGAAGCTGCCATGACTACGAAGACGCTTTATCAAAGGCCATCCTCTTCTTTGAGGGACAGCGCTCGGGGTTCTTGCCACAGGACCAGA GAATGAGTTGGCGTGCCAATTCAGGTCTCAGTGATGGCTGGAGCTACAACACGGACCTCACCGGAGGATACTACGATGCCGGAGATAACATCAAATTCGG CTTTCCGATGGCTTTTACGGCAACAATGTTAGCGTGGAGCGTGCTTGAATTCGGAGACATGATGCCACCCGATGAGCTCAGAAACTCCTTGGTAGCGATA CGTTGGGCCACCGATTATTTGATCAAGACTGTTTCTCAGCCCAACCGTATTTTCGTTCAGGTGGGTGATCCAAGCTCAGACCATGATTGTTGGGAGAGGC CGGAGGACATGGACACAAGCAGGACAGCGTATGCTGTTGATGCACCAAATGCGGCTTCCGATGTCGCTGGTGAAACAGCCGCTGCACTAGCAGCCTCATC CATGGCATTCAGGTCATCCGACCCGGGCTATTCGGAGACATTGCTACGAAATGCTATTAACGCATTCCAATTTGCAGATAGCTACAGGGGTGCTTACAGT GATAATGATAATGTTAAGTATGGGGCCTGCCCTTATTATTGTGATTTTGATGGCTATCAGGTAATTGACTGTGACTTTCTTTGATGATTGAAGTGCTTTT TCCTTATGGATATGTATGAAAGGGTAAGGGACTAATAGCATGAGGAGGATAACGCTTTAAGCTTTTGAATATAGCAGAAATTATAATGATATAGACAACA ATATATCCAAAGGATAAACATGTTATGTAAATTTCAAATCATGAACATGTTATGTGCAATCACCATCTAATTACATTGGCTAAAAGGGAGTAGTAGATAT GATGTATTACCTAACAAAAGTAGATATCCTTTTATTCAAATTTGTGAAAAATGTTACCTGTACAACATCATCAAAGTATATGTCAAGGAATGTTTGCAAT GTGTATATGTAATTTTTGTAATTGGATCCCTTAGTCTTTGGCGGGTAGATTATTGTTATCTTTAAACACGATAGGACGAGTTGCTATGGGGAGCTGCTTG GCTAAGAAGGGCTACTCAAGATGATAATTTCCTCAACTACATTCAAAGCAATGGCAAAACGTTGGGTGCTGATGACAATATCAATGAGTTTGGTTGGGAC AACAAGCATGCTGGCCTTAACGTTCTTGTCTCCAAGGAAGTCTTAGAAGGAAATATAGACTCTCTTGAATCCTACAAGTCCTCAGCAGAGAGCTTCCTAT GCACACTTATACCGGAAACATCAAGTGCACACATAGATTACACTCCTGGTGGACTCATATACAGGCCTGGTGGAAGCAACTTACAACATGCAACTGTCAT CGCTTTCCTTGAGTTGGTGTATGCTAATTACCTGTCTCGCACGTCACAAACCATCAATTGTGGTAATGTCTATGTTAGTGCACAAACACTTCGCCAACGT GCTAAGAAGCAAGTTGATTACATTTTGGGGGATAATCCATTGAATTTATCGTACATGGTTGGCTATGGTAACAATTATCCGCAACGCATTCATCATCGTG GCTCCTCTTTACCTTCCATCAAAGATCATCCTCAGTTTATTGCGTGCAAAGAAGGTTCAATTTACTTCAATTCCACCGATCCTAATCCTAATGTTCTTGT AGGAGCAATTGTTGGCGGACCCGGAGAAGATGATGTTTATGAGGATGATAGAGCTGATTTTAGAAAGTCTGAGCCTACCACATATATTAATGCACCATTT GTTGGGGTTTTAGCATACTTTGTTGCTAATCCTAATCCTTAACTAGTTACTCTGCATAAGTATGAAAATATCTGTCTTTCTTTTTCCTTTGTAAATAAAA GAATATACGAGAAATTAAGTCTCTCATCTTGAGAAACGCAAGAGGGAAGAGGCTTGCTTGTGTTTGGTTGGATATATAGGAATATTATTAGAGTCTGGAG TCACCAACGTAACTGTTTCTGAGACTTCAATTACATTACCAAAGATAGAGATCAGAAGCTTGATTACTACAACTACAAGGTGCTTATTTCTGGATTTTGT CAAGAAAAGGAGTGAGATTGTTATGCTGTGATGTTTGTTAACTATCTTATTTTGTTGTTGTGTGTTTTCAATTATACTACATTTGTTCAAACATGCATAT CTCAACACGTTGTGTGTCATCATGTAATGTATTCCGAGTAAGCGGGAAGGAGTTTTGTGAATTTTAAGTATAAAGTACTATATTTGATTACTTAGTGTTT TATGATCTTAATTCAGTTAAAAAAAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_149816; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309537
| Blastp | Endoglucanase 24 from Arabidopsis with 71.25% of identity |
|---|---|
| Blastx | Endoglucanase 23 from Oryza sativa with 71.48% of identity |
| Eggnog | endo-glucanase(ENOG410YC2H) |
| Kegg | Link to kegg annotations (AT4G39010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438196.1) |
| Pfam | Glycosyl hydrolase family 9 (PF00759.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |