Id Trinity | TRINITY_DN47110_c4_g1_i1 |
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Name Transcript | Ll_transcript_310757 |
Sequence | TTGAAGTGTTGTTAAACAAAAAGAACCCACCATCTCGAACTAAACTAGTTACTTCCCTCATTCACTAAACGTGTCTTCTTTGATTTTCACTAATGTTTTA GAGAGAGTGAGAGTGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGACTGTGATGGCTCCAAACTTGGGTGGTAGAGTGGAAGATGGTGGCACTGGGCGAG GAACAAGACCTATCTGAACATAACCCACCTTTTCAATTTCCAAAAAGATTCATTTTTTTTCTTCCTTTCAATCTCTTATGTTCTGGGTTTGGATTTTCTT CTTTCAACATGTGATTCAGGTTTAAAAGAAATGATCTGTTAATAGGAGCTCTTCTGACTTTTGGCAATGGAAATTATGCTTCAAATTCGACTTTGTTCTC TCAGACAGATAATCTGATATCTTTACACTTGCTGTGAATCAAGGAGCCTTAAGTATATTTTTGATTGGTTATTTGTGCTGAATGGTTAAAGCTTCTTCCA AAATTTCATCAGCTACTAAGCAATCAATCTCCTTCGATTACCAGATTTTGGCTTCGTCGTGGAGCCGGGCAAATCTCCTTTGGCAATATAGCTTCCAAGC TCCTATTTTGGAAGAGGAAAATTTATTAACCTTCTATACTTTACTTGTGTTTGAAGATTCGGCTATATTGGGCAAATCTCCTTTGGCAAATTACTTAAAT CCTTTGGTTTGGTTCCTAGCAGTGAAACTATATGAAATTAAATTTTGTCGGCTTTCTGTAACAGTTTTATCTTGCTGAAGTCATTCCACTAGGAACTTCA CACTTTCATCTGGACAAATCTCCTTTGGCATCTTTTGGTTACCTTGGTTTGCTTCTTCCAGCTTCTATATCTTTTTCTTCCAGAAAACCACAAAATAATC GTCTTATAGTTTTAGCTCCTTGATACTTCTAGTGTCGAGAAACTTATCTCAGGAATTTCTTTCTGTTGGAAGTTCCAGTCCAAATTGGGCAAATCTCCTT TGGCATTTTGGAGTCGTTCATCGATTCCTGTTATCCTATCAGACAAATCTCTTGGCATCAAATCTCTGGTTTCAGTGGTCAAGATTATCTTTTTAAGAAA CTAGCTTACTATCTGTGACAAAAGCAGTATCAATCACATACATGTTGTGTTTGTACAAAAATAGACTTGAAATCAATATCTCCATCGTGGATCGCAATAT ATACTGCAACTGAGGTTTAGTGCTTCAATTTACTTGAGAAGGCACCTATTGGTAGATGCTAAAATGACTGATTCCGACTCAGACACTTTCAGTGAGAGCA GCGGTAGTGAGGATCAAGAGGATATTGATTATCTATATGGTGGGCAAGCACGGAGCATATTATCAAGTTTAGAGGAAAGCATCGGGAAGATCGACGATTT TCTCTCATTTGAGAGGACATTTGTTTATGGCGACGTGGTCTGCTCCTTGTCAGACCCATCTGGACAAATGGGCAGGGTCACAAGTGTTGATGTGTTAGTG GACTTGGAAAATGTTCAAGGAAACATATTAAAAAATGTGAACTCCAAAACACTTCTGAAGATCCGATCCATTTCAGAAGGTGATTATGTAATTAAGGGGC CGTGGCTTGGCCAGGTTCAAAGGGTGGTGGACAAAGTGACTGTGTTGTTGGATGATGGATTGAAATGTGAGATCACTGCTTTGGGAAAAGATAAGCTTTT ACCAATGACTCATCATTTTCTTGAAGACTCGCAGTATCTATACTATCCAGGGCAGAGAGTAAAGGTGAACTCTTCCACTGCTTCTAAATCAGCTACATGG CTATGTGGTACCTGGAGAGACAATAAAGATGAAGGAACAGTTTGTGCTGTGGAAGCAGGTTTGGTGTATGTTGAGTGGCTTGCCTCTGCTCTTTTAGGTT CCGATTTTAATGCGAGTTCTCCACCATCCTGGCAAGATTCTGAAAACTTGACCTTGTTGTCGTGTTTTTCACATGCAAACTGGCAGCTTAGTGACTGGTG CATGCTTCAAGTTGCAGACCAAAAGGAACATATGGAACAGGTAGATCTTTCTAATGAGCATGGTATGGCAAGAGGATACACGAGAAGAAAACTCAACTCT AACGTTGGGGAATTATTTATAATTGCAAAGAAAAAGACCAAAGTTGATATTATATGGCAAAATGGTGAACATACATTGGGATTAGATCCGCAGAACTTAG TCCCAGTGAATGTCATTAACACACATGAATTTTGGCCTCACCAGTTTGTGCTGGAAAAAGGTGCTTCTTCTGATGATCCTCTTAAGCCTAGCAGTCAAAG ATGGGGTGTTGTTCTATCCGTGGATGCAAAGGAGCATACTGTAAATGTACAATGGAAAACGGTCCCCATATCTGAGCCTGACAATTTGGCTGTAGACACA ATGATGGAAACTGTGAGTGCATATGAACTTGTTGAGCACCCAGATTTTTCCTGTTGTTTTGGTGATATTGTGTTCAAGGATCAACAACAGCTTGTCTACC TAGCCGATAAAGATAATGCAAAGCCAATGACTGACGTGAATTTGGTGGCTCCTCTGATAGATCGGGACCAAAATCAGAATAACTTCCCTGGTAACTGTTA CCTGTCATGTATTGGCAATGTTACTGGTTTCAAAGATGGTGATGTTGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTTGCACCATATGAAATTTTT CGGATTGATAAACATGAAGGTTCAATTGTAACCCCTAATCCTTATGAAGCAAATCTTGAGGAGTTGCCTCAAGAGATGAATGAACATGGAAGTCCACCTT CTAACCCGAAGGGAAAGGGCTTGTTAAATTATGACGGTGGCAGAGGGAATTGCGAAAAGCATTCTGGAGAGTCTAGCTCCTTTTCCCTTCCTCAAGCCGC CTTTGAATTTTTCTCTAGCATTAAAACCAGCATATTCCAAACACTTGGTGTAACATCACTTTGCAGAGCAGTTTCCTCAGTCCCAACATTTGAAGAGGGA AATGGATCTGATTTTCGTGGTAAGGAAGTTTTGAACACTTGTGACCCCTGCACTGAATCACATTCAATGAGTGGGTTGCAATCTACCGAAGACAGAACTC CATATGATGAAGTTACTGTGACTCGAGAGAGGAATGATTTTCCAGTTTCTATAGACCGCAACAGTCCAGATCGGCTGATGCAGTTTGATATAATAGATAA TTGCTCAGACCACCACTTTTTTGATGAGGGAAAAGGATTAGCATCATCTCAGGTAAAAAGTGGTTGGGCGAAAAAAGTTCAGCAAGAATGGAGCATCCTA GAGAATAATCTTCCTGAAAGTATATATGTCCGTGTTTTTGAAGAAAGGATGGATCTCATGCGAGCAGCCATTGTTGGTGCCTCCGGGACCCCTTATCATG ATGGGTTGTTTTTCTTCGATATATGTTTTCCTCCAGAGTATCCCAGTGAACCACCTATGGTGCACTTCAATTCTGGTGGGCTACGATTAAATCCTAATTT GTACGAGTCGGGGAAAGTCTGTCTGAGTCTGCTAAATACATGGACTGGCACATCCACTGAAGTGTGGAATCCTGGAGCCTCCACAATTCTTCAAGTCCTT CTCTCTCTGCAGGCCCTTGTCCTTAATGATAAGCCTTATTTCAATGAGGCTGGGTATGATCAACAAATCGGAAGAGCTGAAGGAGAAAGAAACTCAGTGA GCTACAATGAGAATGCATTCCTTGTCACCTGCAAATCGATGTTGTATCTGTTAAGAAAGCCACCCAAGCATTTCGAGACAGTGGTGGAAGAGCACTTTCG ACAACGCTCGAAACATATACTTGTTGCTTGTAAGGCATATCTTGAAGGAGTTACCATTGGATGTGCTTTTGGTTCTGGAAACCCTGAGGATGAAAACCAG AAAGGGACTTCTACAGGATTTAAAATCATGCTTTCTAAGCTCTTTCCCAAGCTTGTTGAGGCCTTTTCGGACAAAGGAATTGACTGCAGCCAGTTTAATG AGCTGCAAAAGTAACTCTTATGTGTTGTGAGGAATTGTCAAGCTTTCTTACCAAGTTATTTAAACCTTATGTGTGATTAAATTATCTTGTATTATATGAA ATGTATGCTTGTAGAAACAACAATCTCTACTGTGTTTGGAATTGACATGGTTGGTGTACTAATAATAGAGTAGAGAGATCTTGTGGTGTGTGTATATGTA ACATAATGGCTTGCAGATGTGAAAGCATGAAATAAGAAACACATTGATTGGAGTGATTTACTTCTGAGGTGCCC BLAST |
Tissue | pods |
Gene name | LI_gene_149843; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310757
Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 50.61% of identity |
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Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 50.67% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
Kegg | Link to kegg annotations (AT2G33770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432309.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |