Id Trinity | TRINITY_DN47110_c4_g1_i14 |
---|---|
Name Transcript | Ll_transcript_310773 |
Sequence | CCCCCATTCACTACACTATCACAAAGTTCCCACCTTCACCAAAGCTTTAGCATTTCAGAGAGAGAAGAAAGTGTCTCCCTTCAATGGTGAAACTAGGCCC ATCTGAACAACACTTATCTCTTCCTTCTTCTAATAAGCCTGAAAAAGTTCTGAGCTAAGAAGAGACAAAAGATTGTTTTTTTAAGCTAAAAGCTAAATTT AGGAAGTACCCTTTTAATTTCAGTTTGTTAGAGTCATTGGGTCTATGCTTGTTATAGCTTATATGGGTCCAACCATCCCTGAGGTACAAATGGTTCAAAA GAAATGGTCTTGTAATAGAAGCCATCGAATCAAATTGCAATTGTGTTTCGTATTTCCACTCTTGATGTGAAGCCAGGAGAAGAAAATATTCCTGTTGAAT GGCTAAAGCAGTTCTGGTTACAACTCTTAAATTTTATTGGTTCAAGATATCAACAAATCTTCTTTTGTACCAAATAGATTTCATAGAGAGTGTTTGGCTT CATTCTAGGAGCAAATATTCTTCAATTTAACTTCAAACTTGAAGAGGAAAGTTTCTTTCCTATTTGGCTGTTTGAAGAGTCATTTTTATTGAGCAAACCT CCTTTGACAAAAGTTACTTCGTTTCCTTTGGTTAGGTTCTCTCAGTAAAGACATATATGAATTTTTGCTGGCTTCAGTAAAAATATTACTACTCTGGAGT AATTCCTCTAAATCTCCTTTGGCATCATTTAGTTATCTTGTTCTGCTTCCTTCAATAGCTAGAAATTTTCCTTCCAACAAGCCACTAAAAAACAAAAACT GAGTCCTAGTTCACCAATATTCTGTTGTTTGAAACCTCTCTCAACGGTTTCTTTATGAAAATTTTCCAGTCCAAATTGGGCAAATCTCCTTTGGCATTTG GAGTCCTTAATTGACTCCTATTATCCTATAGCCTATAGGGCAAATCTCCTTTGGCATAAAATCTCATGTTTCAGTGGTCAAGATAATCTTTTGGAGGTAC TGACTATCTGTGACAAAAAAGTTCTATCAAGCAGAAATCCTTTACATTATACACAATTATCCATTGAAGGTCAATACCGGCATTCCAGTCGTGACCGAAA TATATACTTACACTGGGATAGGGTGCTTCATTTTGCTTGAGAAGGCATATTGTCGATGGATGCACTCAGTAGTGATTCAGACTGGGAGACATTCAGTGAC AGTAGCTGCAGTGAGGACCAAGAAGAAAATGATTTTCTATATGGTGGTCATGCTCAGAACATATTATCAAGTTTAGAGCAAAGCATTGGGAAGATAGACG ATTTTCTCTCATTTCAGAGAACATTTGTTCAAGGAGATTTAGTCTGCTCCTTGCCAGACCAATCTGGACAGATGGGCATGGTCGTAAGTGTCAATGTGTT TATGGATTTAGAAAATGATCACGGGAAAGTATTGAAAGACGTGAGCTCGAAGAAACTGTCAAAGATTCGCTCCATTTCAGAAGGTGATTATGTGATGAAG GGGACGTGGCTAGGTCAGGTTAAAAGGGTGGTGGACAAAGTGACTGTTTTGTTTGATGATGGAGCTAAATGTGCTATCACTGCATCAGAGAGAGAGAACC TTATACCACTGACTCATAATTTTCCTGAAGATTCAGATTATTCATACTATCCTGGGCAGAGAGTAAAGGTTAAGTCGTCAAGTGCTTATAAAAGAGATAG ATGGTTATGTGGCACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTTCTGTGGAAGCAGGTTTCGTGTACATTAACTGGATTGCTTCAGTTCCCGTG TGTTGCGATTTGAGTGTGAATGCTCCCCCGTGCTGGCAAGATTCCATGAACTTGACTGTGTTGTCATGTTTTTCACATGCAAACTGGCAACTTGGTGACT GGTGCATGCTCTCAGCTGCAGACCAAAAGGAACAGGTTATTCAAGATGCACCTATAAGTGATCTTAGAATGGAGCATAGTATGGAAAGAGGAAATAAGAT AAGAAACCTTAGCTCTTACATTGGGGAACTATTTATAATTGGGAAGATAAAGACCAAAGTTGACATTGTGTGGCAAAATGGTGAATATACTTTGGGGTTA GGTCCTGAGAGTTTAATACCAGTGAATATAATAAACAATCATGAATTTTGGCCTCATCAGTTTGTGCTGGAAAAAGGTGCTTCTTATGATCCTCTTAACC CTAGAAGTCAAAGATGGGGTGTTGTCCAATGTGTGGATGCAAAGGAGCATATTGTGAAGGTACAATGGAAAACTGCTTCCATATCCGACCCAGATTATTT GGATGGAGGAAAAATGGAGGAGACTGTGAGTGCGTACGAGCTTATAGAGCACCCAGACTACTCCTTTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAA AAACAGCTTGGTTATCATGCTGAGAAAGATAATGCAAAGTCAGTGATTGACTTGAATGCGGAGGCTGCTCTTAAAGACAGGAACCGAAAGGGCTATCAGG ATGAGTTACCTGATAACCGTATCCTATGCTGTATTGGCAATGTTATTGGTTTCAAAGATGGTGAAGTGCAGGTGAAATGGGCTACTGGTTTCACAACCAA GGTTGCGCCTTGTGAAATTTTTCGGATCGATGAACATGAAGGTTCAAATGTTGAGCAGTTAATTCAAGGGATGATTGAACATGGAAATTTACCTTCTCAA CAGAAGGGAAAGGTGAGGGAATATATTGAACTTCACGAGGGTGAACCTCGGTGCAACAGTAAAGTTGCTTTCCCTGTGACCTCCGGTCACGGGTTCAAAT CCTAGAAGCATCGGGCGGATAAGGTTGCGTACATATACCATCCCCATACCTCACTAGGTGGGAGCAATGGGCCGCCTTTATTATATATTTTTATCTACGT ATATCATGTGTATGTTTGTATATGATAAACTGAATATCACTTGTGATGATTAGGACATGTCAAATTGTGATGGCATTAGAGAGAATTATGAAAAGTATCC ACTTGAGTGTAGTTCCTTTTCCTTTCCCCAAGCTGCCTTAGAACTTTTCTCAAGCATCAAAACAAGTATACTCCAAACACTTGGTGGAACATCACTTTCA GCAGTTTCCTCAGTACCTACATTTGAAGAGGATAATGGATCTGATTTTATTGATAAGCAGAATTTGGAAACTCGTGACCATTGCACTGAATCACATCCAA ATACTCAGTTGCAATCTGCTGAAGATTGCACTTCATATCCACAAGTTATTAGGATTCATGAGAAGATTGATTTTCCATTTTCTTCAGACAGCAACAGTTC AAACCAGTTTAAGCAGTTTGACGTGATAGAAAATTGCTCTGACCACTACTTTTTGGATGAGGGAGAAGGGTTGAAATTATCTCAGATTAAAAGAAGTTGG ATGAAAAAGGTTCAACAAGAATGGAGCATCCTCCAGAAAAATCTTCCTGGTGTGCACTTTATCTTATTATTATTTATTCTTTTGAACCTTGTTTCTGGAT GTATGGACACACTAAACAAGATAGGATTAGAAATGAATGCAATAGGGAGAAAGTTGGAGCAGTTCTTATTCTAGAAAAGATGTTAGAATCACAGCTTAGG TGGTTATGAAACAATTCAATAATGATTTTGATTACTAGTTTTTGCTTATGAAAAGGGAAAATATCCTTACCAATTTCTATAAACTATTTATGTTCACATC TTTATTGACCCAAACAGAAACTATTTATGTTCGTGTTTTTGAAGAAAGAATGGATCTCATGCGAACGGCAATTGTTGGTGCACGTGGAACCCCTTATCAT GATGGGTTGTTTTTCTTTGATATACATTTCCCTCCAGAATATCCAAATGAACCCCCTGTAAGCTTCTAAATGTACTTTGCAGTGTTTTGTTACTTACTTT CATGCATGGTTCATGCATGGCACCCTTGTTTATAAGGTCCTCCTCTTACTTTGAAATGTGAAGTTCAATATTTATTGATATCTGAACAAACTCTCATGTA GTACAAATTTCATGCAGATGGTGCACTACAATTCTGGTGGGCTTAGATTAAATCCTAATTTGTATGAGTCAGGGAAAATCTGTCTCAGTCTCCTGAACAC TTGGACTGGTACAGGCACTGAAGTGTGGAACCCTGGAGCCTCCACAATTCTTCAACTCCTTCTCTCTCTGCAAGCCCTTGTCCTTAATGACAAGCCTTAT TTCAATGAGGCTGGATATGACCAACAAATCGGCCGAGCCGAGGGAGAGAAAAACTCAGTCAGTTACAATGAGAATGTTTTCCTTGTCACAAGCAAATCCA TGTTGTATCTATTAAGAAAACCACCCAAGCATTTTGAGATACTGGTGGAAGAACACTTCAGGAAGCGCTCCCGACATATACTTCGTGCTCGTAAGGCATG TCTTGAAGGAGCTCCCATTGGATGTGCTTTTGGAAGTGGAAAAACTGAACATGAAAACCAAAAGGGAACTTCTACAGGGTTCAAAATTATGCTTGCTAAG ATCTTCCCCAAGCTTGTAGAGGCATTTTCTGATAAAGGAATTGATTGCAGTCAGTTTGTTGATATGCAGAAATAACTCTCATGCTAAGTTTTAAGTAACT CTTCAAGTTTCCCAACCAGGATATTGCAACCTTAAGTGTAATATTAATATATTTACAGGTATTTGTATAATATCAAATGTAACCTTGTTAAAGCACCAAT CTCTTGAATAAATTAAAGTATGATAAAATGTCATTTTCTCTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_149843; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310773
Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 42.78% of identity |
---|---|
Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 42.78% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
Kegg | Link to kegg annotations (AT2G33770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423805.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |