Id Trinity | TRINITY_DN47110_c4_g1_i16 |
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Name Transcript | Ll_transcript_310775 |
Sequence | TAAAGCTCAAAGTGATTCCTTAGGTTCCATTTCTTTGATGTAAATTTAAAGATACTTAATTTATCAATAGCTTTTCACTAGTTTAATCTCAAGTTCTAGC TTTTCCTCTTGCTTCCTAAACAATTGTGTTACATTATAAAATAGCCAGCTTGGGTCTCAGCCATTATCATTCCTTTGCAATTTCCATTTTCCTTACATAA TGAAAAGGGTTAGAGAAAGTATTCACTAGTGATTTGTTGCAGGTTCAAAAGAAATGGTCTTGTAATAGAAGCCATCGAATCAAATTGCAATTGTGTTTCG TATTTCCACTCTTGATGTGAAGCCAGGAGAAGAAAATATTCCTGTTGAATGGCTAAAGCAGTTCTGGTTACAACTCTTAAATTTTATTGGTTCAAGATAT CAACAAATCTTCTTTTGTACCAAATAGATTTCATAGAGAGTGTTTGGCTTCATTCTAGGAGCAAATATTCTTCAATTTAACTTCAAACTTGAAGAGGAAA GTTTCTTTCCTATTTGGCTGTTTGAAGAGTCATTTTTATTGAGCAAACCTCCTTTGACAAAAGTTACTTCGTTTCCTTTGGTTAGGTTCTCTCAGTAAAG ACATATATGAATTTTTGCTGGCTTCAGTAAAAATATTACTACTCTGGAGTAATTCCTCTAAATCTCCTTTGGCATCATTTAGTTATCTTGTTCTGCTTCC TTCAATAGCTAGAAATTTTCCTTCCAACAAGCCACTAAAAAACAAAAACTGAGTCCTAGTTCACCAATATTCTGTTGTTTGAAACCTCTCTCAACGGTTT CTTTATGAAAATTTTCCAGTCCAAATTGGGCAAATCTCCTTTGGCATTTGGAGTCCTTAATTGACTCCTATTATCCTATAGCCTATAGGGCAAATCTCCT TTGGCATAAAATCTCATGTTTCAGTGGTCAAGATAATCTTTTGGAGGTACTGACTATCTGTGACAAAAAAGTTCTATCAAGCAGAAATCCTTTACATTAT ACACAATTATCCATTGAAGGTCAATACCGGCATTCCAGTCGTGACCGAAATATATACTTACACTGGGATAGGGTGCTTCATTTTGCTTGAGAAGGCATAT TGTCGATGGATGCACTCAGTAGTGATTCAGACTGGGAGACATTCAGTGACAGTAGCTGCAGTGAGGACCAAGAAGAAAATGATTTTCTATATGGTGGTCA TGCTCAGAACATATTATCAAGTTTAGAGCAAAGCATTGGGAAGATAGACGATTTTCTCTCATTTCAGAGAACATTTGTTCAAGGAGATTTAGTCTGCTCC TTGCCAGACCAATCTGGACAGATGGGCATGGTCGTAAGTGTCAATGTGTTTATGGATTTAGAAAATGATCACGGGAAAGTATTGAAAGACGTGAGCTCGA AGAAACTGTCAAAGATTCGCTCCATTTCAGAAGGTGATTATGTGATGAAGGGGACGTGGCTAGGTCAGGTTAAAAGGGTGGTGGACAAAGTGACTGTTTT GTTTGATGATGGAGCTAAATGTGCTATCACTGCATCAGAGAGAGAGAACCTTATACCACTGACTCATAATTTTCCTGAAGATTCAGATTATTCATACTAT CCTGGGCAGAGAGTAAAGGTTAAGTCGTCAAGTGCTTATAAAAGAGATAGATGGTTATGTGGCACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTT CTGTGGAAGCAGGTTTCGTGTACATTAACTGGATTGCTTCAGTTCCCGTGTGTTGCGATTTGAGTGTGAATGCTCCCCCGTGCTGGCAAGATTCCATGAA CTTGACTGTGTTGTCATGTTTTTCACATGCAAACTGGCAACTTGGTGACTGGTGCATGCTCTCAGCTGCAGACCAAAAGGAACAGGTTATTCAAGATGCA CCTATAAGTGATCTTAGAATGGAGCATAGTATGGAAAGAGGAAATAAGATAAGAAACCTTAGCTCTTACATTGGGGAACTATTTATAATTGGGAAGATAA AGACCAAAGTTGACATTGTGTGGCAAAATGGTGAATATACTTTGGGGTTAGGTCCTGAGAGTTTAATACCAGTGAATATAATAAACAATCATGAATTTTG GCCTCATCAGTTTGTGCTGGAAAAAGGTGCTTCTTATGATCCTCTTAACCCTAGAAGTCAAAGATGGGGTGTTGTCCAATGTGTGGATGCAAAGGAGCAT ATTGTGAAGGTACAATGGAAAACTGCTTCCATATCCGACCCAGATTATTTGGATGGAGGAAAAATGGAGGAGACTGTGAGTGCGTACGAGCTTATAGAGC ACCCAGACTACTCCTTTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAAAAACAGCTTGGTTATCATGCTGAGAAAGATAATGCAAAGTCAGTGATTGA CTTGAATGCGGAGGCTGCTCTTAAAGACAGGAACCGAAAGGGCTATCAGGATGAGTTACCTGATAACCGTATCCTATGCTGTATTGGCAATGTTATTGGT TTCAAAGATGGTGAAGTGCAGGTGAAATGGGCTACTGGTTTCACAACCAAGGTTGCGCCTTGTGAAATTTTTCGGATCGATGAACATGAAGGTTCAAATG TTGAGCAGTTAATTCAAGGGATGATTGAACATGGAAATTTACCTTCTCAACAGAAGGGAAAGGACATGTCAAATTGTGATGGCATTAGAGAGAATTATGA AAAGTATCCACTTGAGTGTAGTTCCTTTTCCTTTCCCCAAGCTGCCTTAGAACTTTTCTCAAGCATCAAAACAAGTATACTCCAAACACTTGGTGGAACA TCACTTTCAGCAGTTTCCTCAGTACCTACATTTGAAGAGGATAATGGATCTGATTTTATTGATAAGCAGAATTTGGAAACTCGTGACCATTGCACTGAAT CACATCCAAATACTCAGTTGCAATCTGCTGAAGATTGCACTTCATATCCACAAGTTATTAGGATTCATGAGAAGATTGATTTTCCATTTTCTTCAGACAG CAACAGTTCAAACCAGTTTAAGCAGTTTGACGTGATAGAAAATTGCTCTGACCACTACTTTTTGGATGAGGGAGAAGGGTTGAAATTATCTCAGATTAAA AGAAGTTGGATGAAAAAGGTTCAACAAGAATGGAGCATCCTCCAGAAAAATCTTCCTGGTGTGCACTTTATCTTATTATTATTTATTCTTTTGAACCTTG TTTCTGGATGTATGGACACACTAAACAAGATAGGATTAGAAATGAATGCAATAGGGAGAAAGTTGGAGCAGTTCTTATTCTAGAAAAGATGTTAGAATCA CAGCTTAGGTGGTTATGAAACAATTCAATAATGATTTTGATTACTAGTTTTTGCTTATGAAAAGGGAAAATATCCTTACCAATTTCTATAAACTATTTAT GTTCACATCTTTATTGACCCAAACAGAAACTATTTATGTTCGTGTTTTTGAAGAAAGAATGGATCTCATGCGAACGGCAATTGTTGGTGCACGTGGAACC CCTTATCATGATGGGTTGTTTTTCTTTGATATACATTTCCCTCCAGAATATCCAAATGAACCCCCTGTAAGCTTCTAAATGTACTTTGCAGTGTTTTGTT ACTTACTTTCATGCATGGTTCATGCATGGCACCCTTGTTTATAAGGTCCTCCTCTTACTTTGAAATGTGAAGTTCAATATTTATTGATATCTGAACAAAC TCTCATGTAGTACAAATTTCATGCAGATGGTGCACTACAATTCTGGTGGGCTTAGATTAAATCCTAATTTGTATGAGTCAGGGAAAATCTGTCTCAGTCT CCTGAACACTTGGACTGGTACAGGCACTGAAGTGTGGAACCCTGGAGCCTCCACAATTCTTCAACTCCTTCTCTCTCTGCAAGCCCTTGTCCTTAATGAC AAGCCTTATTTCAATGAGGCTGGATATGACCAACAAATCGGCCGAGCCGAGGGAGAGAAAAACTCAGTCAGTTACAATGAGAATGTTTTCCTTGTCACAA GCAAATCCATGTTGTATCTATTAAGAAAACCACCCAAGCATTTTGAGATACTGGTGGAAGAACACTTCAGGAAGCGCTCCCGACATATACTTCGTGCTCG TAAGGCATGTCTTGAAGGAGCTCCCATTGGATGTGCTTTTGGAAGTGGAAAAACTGAACATGAAAACCAAAAGGGAACTTCTACAGGGTTCAAAATTATG CTTGCTAAGATCTTCCCCAAGCTTGTAGAGGCATTTTCTGATAAAGGAATTGATTGCAGTCAGTTTGTTGATATGCAGAAATAACTCTCATGCTAAGTTT TAAGTAACTCTTCAAGTTTCCCAACCAGGATATTGCAACCTTAAGTGTAATATTAATATATTTACAGGTATTTGTATAATATCAAATGTAACCTTGTTAA AGCACCAATCTCTTGAATAAATTAAAGTATGATAAAATGTCATTTTCTCTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_149843; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310775
Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 39.54% of identity |
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Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 40.56% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
Kegg | Link to kegg annotations (AT2G33770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423805.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |